https://github.com/ibchgenomic/bacterial-ko-phylogenomics

analyzing bacterial genome based ontologies and phylogenomics informativeness
https://github.com/ibchgenomic/bacterial-ko-phylogenomics

bioinformatics bioinformatics-scripts genome-analysis genome-annotation metagenomics metagenomics-analysis metagenomics-bioinformatics metagenomics-data phylogenomics phylogenomics-pipeline

Last synced: about 1 month ago
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analyzing bacterial genome based ontologies and phylogenomics informativeness

• Host: GitHub
• URL: https://github.com/ibchgenomic/bacterial-ko-phylogenomics
• Owner: IBCHgenomic
• License: mit
• Created: 2024-08-21T18:21:29.000Z (8 months ago)
• Default Branch: main
• Last Pushed: 2024-08-21T20:17:43.000Z (8 months ago)
• Last Synced: 2025-03-11T23:15:33.180Z (about 1 month ago)
• Topics: bioinformatics, bioinformatics-scripts, genome-analysis, genome-annotation, metagenomics, metagenomics-analysis, metagenomics-bioinformatics, metagenomics-data, phylogenomics, phylogenomics-pipeline
• Language: Python
• Homepage:
• Size: 2.46 MB
• Stars: 0
• Watchers: 1
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

        
# KO-phylogenomics

- This repository contains the Python, and R code which i coded using the mathematical expression for the genome based ontologies annotation and the phylogenomics informativeness. - Although i coded this for plants and bacteria but this is applicable to any genome annotations.

Gaurav Sablok \

University of Potsdam \

Potsdam,Germany