https://github.com/ibchgenomic/readanalyzer
readanalyzer for miseq, nextseq, novase and longreads
https://github.com/ibchgenomic/readanalyzer
bioinformatics genome-analysis genome-sequencing illumina-sequencing sequence-classification sequencing-data
Last synced: 3 months ago
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readanalyzer for miseq, nextseq, novase and longreads
- Host: GitHub
- URL: https://github.com/ibchgenomic/readanalyzer
- Owner: IBCHgenomic
- License: mit
- Created: 2024-11-20T17:12:41.000Z (11 months ago)
- Default Branch: main
- Last Pushed: 2025-02-25T19:11:24.000Z (7 months ago)
- Last Synced: 2025-03-11T23:15:36.517Z (7 months ago)
- Topics: bioinformatics, genome-analysis, genome-sequencing, illumina-sequencing, sequence-classification, sequencing-data
- Language: Rust
- Homepage:
- Size: 3.18 MB
- Stars: 0
- Watchers: 1
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
- License: LICENSE
Awesome Lists containing this project
README
# readanalyzer
- rust readanalyzer
- provide the reads in the fastq from novaseq, nextseq and clip the regions according to your choice.
- please see the last commit message and if it says compiled binary then it is completed or else still in development version.
```
cargo build
```
```
```
readanalyzer: analyze reads from illumina and long reads
Usage: readanalyzer
Commands:
clip-fastq clipping specific regions
quality-clip drop specific quality
drop-quality drop specific score
adapter-clipper remove the quality and the adapter
sync
help Print this message or the help of the given subcommand(s)
Options:
-h, --help Print help
-V, --version Print version
```
Gaurav Sablok