https://github.com/illustratien/toolphd

Make your analysis simple and reproducible
https://github.com/illustratien/toolphd

academic analysis data phd publications r r-package reproducible-research scientific

Last synced: 5 months ago
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Make your analysis simple and reproducible

• Host: GitHub
• URL: https://github.com/illustratien/toolphd
• Owner: Illustratien
• Created: 2023-08-18T08:47:01.000Z (almost 3 years ago)
• Default Branch: master
• Last Pushed: 2025-02-14T09:07:23.000Z (over 1 year ago)
• Last Synced: 2025-02-14T10:23:34.457Z (over 1 year ago)
• Topics: academic, analysis, data, phd, publications, r, r-package, reproducible-research, scientific
• Language: R
• Homepage: https://illustratien.github.io/toolPhD/
• Size: 6.22 MB
• Stars: 0
• Watchers: 1
• Forks: 0
• Open Issues: 3
• Metadata Files:
  • Readme: README.Rmd

Awesome Lists containing this project

README

          
---

output: rmarkdown::github_document

always_allow_html: true

---

```{r, echo = FALSE,message=FALSE}

knitr::opts_chunk$set(

  collapse = TRUE,

  comment = "",

  fig.path = "man/figures/"

)

suppressWarnings(devtools::load_all("."))

```

```{r,echo = FALSE, message = FALSE}

suppressWarnings(devtools::load_all("."))

wholetext <-  packageDescription("toolPhD", fields = "Description")

Section<- strsplit(wholetext,"This R")

text1 <- Section[[1]][1]

text2 <- unlist(strsplit(paste0("This R",Section[[1]][2]),"\n"))

```

## toolPhD: Accomplish your academic publication with ease and aesthetic.

[![License: GPL-3](https://img.shields.io/badge/License-GPL3-orange)](https://www.r-project.org/Licenses/)

[![Website - pkgdown](https://img.shields.io/badge/website-tutorial-green)](https://illustratien.github.io/toolPhD/articles/toolPhD.html)

[![Github Code Size](https://img.shields.io/github/languages/code-size/Illustratien/toolPhD.svg)](https://github.com/Illustratien/toolPhD)

[![Last-changedate](https://img.shields.io/badge/last%20change-`r gsub('-', '--', Sys.Date())`-yellowgreen.svg)](https://github.com/Illustratien/toolPhD/commits/master)

[![minimal R version](https://img.shields.io/badge/R>%3D-3.5.0-6666ff.svg?logo=R)](https://cran.r-project.org/)

[![rstudio mirror downloads](https://cranlogs.r-pkg.org/badges/grand-total/toolPhD?color=green)](https://CRAN.R-project.org/package=toolPhD)

## Introduction



The package `toolPhD` is by-product of the journey of author's PhD. Hopefully you find these function also useful for you.

Further analysis for original publication using this package can be found in the link ([click here](https://github.com/Illustratien/Wang_2023_TAAG)).

## Installation

The development version can be installed from github as follows:

```{r, eval=FALSE}

if (!require('devtools')) install.packages('devtools')

devtools::install_github("Illustratien/toolPhD")

# or

if (!require('remotes')) install.packages('remotes')

remotes::install_github("Illustratien/toolPhD")

```

To update the package:

```{r, eval=FALSE}

detach("package:toolPhD", unload = TRUE)

devtools::install_github("Illustratien/toolPhD")

```

## Descriptions

There are many useful functions in this package. For detailed tutorial with examples and references, please click the side tab `Get started` for general tutorial and `Refernce` for individual function example.

Here is an example for `violin_plot()`

```{r}

library(toolPhD)

library(ggplot2)

violin_plot(mtcars,cyl,mpg,labx="Number of cylinders",laby="Miles/gallon")

```

Useful 1:1 line plot `plot_121()`

```{r}

library(toolPhD)

library(ggplot2)

plot_121(iris,Sepal.Length,Petal.Length,color=Species)

plot_121(iris,Sepal.Length,Petal.Length)

```

## Citing `toolPhD`

To cite the methods in the package please use:

Wang T (2023). toolPhD: Accomplish your academic publication with ease and aesthetic. R package version 0.1.0.

```

@Manual{,

  title = {toolPhD: Pave your academic path with profession and aesthetic.},

  author = {Tien-Cheng Wang},

  year = {2023},

  note = {R package version 0.1.0},

}

```