https://github.com/microbiome/oma_manuscript
https://github.com/microbiome/oma_manuscript
Last synced: 5 months ago
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- Host: GitHub
- URL: https://github.com/microbiome/oma_manuscript
- Owner: microbiome
- Created: 2025-08-10T17:19:27.000Z (10 months ago)
- Default Branch: devel
- Last Pushed: 2025-08-11T09:11:55.000Z (10 months ago)
- Last Synced: 2025-08-11T11:24:08.489Z (10 months ago)
- Language: BibTeX Style
- Size: 60.5 MB
- Stars: 0
- Watchers: 1
- Forks: 3
- Open Issues: 3
-
Metadata Files:
- Readme: README.md
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README
# Orchestrating Microbiome Analysis with Bioconductor — article 
This repository includes all the source files to used to generate article on
_Orchestrating Microbiome Analysis with Bioconductor_. This article is written
only using Quarto files, based on the
[Nature Quarto template](https://github.com/christopherkenny/nature).
## Project structure
```
.
├── _extensions/ # Quarto extensions
├── bibliography.bib # Bibliography / references
├── data/ # Data files used in the article
├── fig.eps # EPS figure used in the manuscript
├── figures/ # Additional figures
├── manuscript.qmd # Main Quarto source file
├── manuscript.tex # Generated LaTeX source
├── manuscript.pdf # Rendered PDF output
├── README.md # Project documentation
├── sn-apacite.bst # BibTeX style file (APA citation style)
├── sn-aps.bst # BibTeX style file (APS style)
├── sn-basic.bst # BibTeX style file (Basic Springer style)
├── sn-chicago.bst # BibTeX style file (Chicago style)
├── sn-jnl.cls # Springer LaTeX class file
├── sn-mathphys-ay.bst # BibTeX style file (Math/Physics, author-year)
├── sn-mathphys-num.bst # BibTeX style file (Math/Physics, numeric)
├── sn-nature.bst # BibTeX style file (Nature style)
└── sn-vancouver.bst # BibTeX style file (Vancouver style)
```
## Funding
This project received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No 952914 ([FindingPheno](https://findingpheno.eu/)).