https://github.com/mittelmark/pbi
R package with functions for the course Practical Bioinformatics at the University of Potsdam
https://github.com/mittelmark/pbi
machine-learning package r statistics teaching
Last synced: about 1 year ago
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R package with functions for the course Practical Bioinformatics at the University of Potsdam
- Host: GitHub
- URL: https://github.com/mittelmark/pbi
- Owner: mittelmark
- License: other
- Created: 2024-03-08T13:48:34.000Z (over 2 years ago)
- Default Branch: main
- Last Pushed: 2025-03-18T14:45:18.000Z (over 1 year ago)
- Last Synced: 2025-03-18T15:45:14.009Z (over 1 year ago)
- Topics: machine-learning, package, r, statistics, teaching
- Language: R
- Homepage:
- Size: 220 KB
- Stars: 1
- Watchers: 1
- Forks: 0
- Open Issues: 1
-
Metadata Files:
- Readme: README.md
- License: LICENSE
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README
# pbi - R package for Practical Bioinformatics 
This is a package for the course Practical Bioinformatics for the Master
course Molecular Biology and Biochemistry at the University of Potsdam.
The package contains functions and data used in the lectures and exercises of this course.
## Installation
To install the package you can either use the package remotes to install from
the current github sources or you download and install the latest release.
First let's show how to install the latest version directly from Gihub:
```
> install.packages("remotes")
> library(remotes)
> remotes::install_github("https://github.com/mittelmark/pbi")
```
To install instead the latest release version which should be more stable use the following command:
```
> install.packages("https://github.com/mittelmark/pbi/releases/download/v0.1.1/pbi_0.1.1.tar.gz")
```
## Package documentation
The package documentation for version 0.1.0 can be seen here: [pbi-manual.pdf](https://github.com/mittelmark/pbi/files/14588148/pbi-manual.pdf)
The vignette can be viewed after installing the package by writing into the terminal this: `vignette("pbi-tutorial")`
## Author and Copyright
Author: Detlef Groth, University of Potsdam, Germany
Co-authors:
- Vera Burdova, University of Potsdam, Germany
- Jillian Hoffmann, University of Potsdam, Germany
- Lisa Banu Kurt, University of Potsdam, Germany
License: MIT License see the file [LICENSE](LICENSE) for details.
## Bug reporting
In case of bugs and suggestions, use the [issues](../../issues) link on top.