https://github.com/mrke/NicheMapR

R implementation of Niche Mapper software for biophysical modelling
https://github.com/mrke/NicheMapR

Last synced: about 2 months ago
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R implementation of Niche Mapper software for biophysical modelling

• Host: GitHub
• URL: https://github.com/mrke/NicheMapR
• Owner: mrke
• License: gpl-3.0
• Created: 2015-11-06T00:49:03.000Z (about 9 years ago)
• Default Branch: master
• Last Pushed: 2024-10-29T00:25:06.000Z (2 months ago)
• Last Synced: 2024-10-29T19:49:25.127Z (2 months ago)
• Language: R
• Size: 37.4 MB
• Stars: 63
• Watchers: 17
• Forks: 34
• Open Issues: 2
• Metadata Files:
  • Readme: README.md
  • License: License.txt

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• open-sustainable-technology - NicheMapR - Modelling the thermodynamic constraints on life. (Biosphere / Ecological and Environmental Modeling)

README

        
# NicheMapR

R implementation of Niche Mapper software for biophysical modelling

Copyright (C) 2018  Michael R. Kearney and Warren P. Porter

Installation from github:

library(devtools)

install_github('mrke/NicheMapR')

See also https://mrke.github.io/getting_started/

Citations: 

Kearney, M. R., & Porter, W. P. (2017). 

NicheMapR - an R package for biophysical modelling: The microclimate model. 

Ecography, 40(5), 664–674.

https://doi.org/10.1111/ecog.02360

Kearney, M. R., & Porter, W. P. (2020). 

NicheMapR – an R package for biophysical modelling: The ectotherm and Dynamic Energy Budget models. 

Ecography, 43(1), 85–96.

https://doi.org/10.1111/ecog.04680

Kearney, M. R., Briscoe, N. J., Mathewson, P. D., & Porter, W. P. (2021). 

NicheMapR – an R package for biophysical modelling: The endotherm model. 

Ecography, 44(11), 1595–1605. 

https://doi.org/10.1111/ecog.05550

Kearney, M. R., Porter, W. P., & Huey, R. B. (2021).

Modelling the joint effects of body size and microclimate on heat budgets and foraging opportunities of ectotherms. 

Methods in Ecology and Evolution, 12(13), 458–467. 

https://doi.org/10.1111/2041-210X.13528

Kearney, M. R., and Enriquez-Urzelai, U. (2023). A general framework for jointly modelling thermal and hydric constraints on developing eggs. Methods in Ecology and Evolution, 14(2), 583–595.

https://doi.org/10.1111/2041-210X.14018

Kearney, M. R., and Leigh, A. (2024). 

Fast, accurate and accessible calculations of leaf temperature and its physiological consequences with NicheMapR. Methods in Ecology and Evolution, 15(9), 1516-1531.

https://doi.org/10.1111/2041-210X.14373

This program is free software: you can redistribute it and/or modify it 

under the terms of the GNU General Public License as published by the 

Free Software Foundation, either version 3 of the License, or (at your

option) any later version.

This program is distributed in the hope that it will be useful,

but WITHOUT ANY WARRANTY; without even the implied warranty of

MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the

GNU General Public License for more details.

You should have received a copy of the GNU General Public License

along with this program.  If not, see .