https://github.com/stm/holepunch-compendium
https://github.com/stm/holepunch-compendium
Last synced: 4 months ago
JSON representation
- Host: GitHub
- URL: https://github.com/stm/holepunch-compendium
- Owner: stm
- License: other
- Created: 2023-02-13T09:43:24.000Z (over 3 years ago)
- Default Branch: main
- Last Pushed: 2023-02-13T11:19:02.000Z (over 3 years ago)
- Last Synced: 2025-03-16T06:16:51.646Z (over 1 year ago)
- Language: TeX
- Size: 504 KB
- Stars: 0
- Watchers: 1
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.Rmd
- Contributing: CONTRIBUTING.md
- License: LICENSE
Awesome Lists containing this project
README
---
output: github_document
---
[](https://mybinder.org/v2/gh/stm/holepunch-compendium/main?urlpath=rstudio)
```{r, echo = FALSE}
knitr::opts_chunk$set(
collapse = TRUE,
comment = "#>",
fig.path = "README-"
)
```
# holepunch-compendium
This repository contains the data and code for our reproduction paper:
> Krystalli, A & Boettiger, C, (2018). _Partial Reproduction of Boettiger Ecology Letters 2018;21:1255–1267 with rrtools_.
Our reproduction pre-print is online here:
> Krystalli, A & Boettiger, C, (2018). _Partial Reproduction of Boettiger Ecology Letters 2018;21:1255–1267 with rrtools_, Accessed `r format(Sys.Date(), "%d %b %Y")`. Online at
### How to cite
Please cite this compendium as:
> Krystalli, A, (`r format(Sys.Date(), "%Y")`). _Compendium of R code and data for 'Partial Reproduction of Boettiger Ecology Letters 2018;21:1255–1267 with rrtools'_. Accessed `r format(Sys.Date(), "%d %b %Y")`. Online at
### How to download or install
You can download the compendium as a zip from from this URL:
### Reproducing the paper
The paper can be found at `analysis/paper/paper.Rmd`. Open the file and
click on **knit** to reproduce the paper. Or run:
``` r
rmarkdown::render(file.path("analysis", "paper", "paper.Rmd"))
```
### Licenses
**Text and figures :** [CC-BY-4.0](http://creativecommons.org/licenses/by/4.0/) Copyright (c) 2018 Carl Boettiger.
**Code :** [MIT](LICENSE.md) Copyright (c) 2018 Anna Krystalli and Carl Boettiger.
**Data :** [CC-BY-4.0](http://creativecommons.org/licenses/by/4.0/), Copyright (c) 2018 Carl Boettiger.
### Contributions
We welcome contributions from everyone. Before you get started, please see our [contributor guidelines](CONTRIBUTING.md). Please note that this project is released with a [Contributor Code of Conduct](CONDUCT.md). By participating in this project you agree to abide by its terms.