https://github.com/tetratech/baytrends

Evaluate long-term trends in the Chesapeake Bay using a Generalized Additive Modeling (GAM) approach
https://github.com/tetratech/baytrends

r-package

Last synced: 3 months ago
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Evaluate long-term trends in the Chesapeake Bay using a Generalized Additive Modeling (GAM) approach

• Host: GitHub
• URL: https://github.com/tetratech/baytrends
• Owner: tetratech
• Created: 2017-12-04T17:40:27.000Z (almost 7 years ago)
• Default Branch: main
• Last Pushed: 2024-07-26T13:58:32.000Z (4 months ago)
• Last Synced: 2024-08-08T02:41:15.737Z (3 months ago)
• Topics: r-package
• Language: HTML
• Homepage: https://tetratech.github.io/baytrends/
• Size: 71.4 MB
• Stars: 12
• Watchers: 4
• Forks: 4
• Open Issues: 14
• Metadata Files:
  • Readme: README.Rmd
  • Changelog: NEWS

Awesome Lists containing this project

• open-sustainable-technology - baytrends - Evaluate long-term trends in the Chesapeake Bay using a Generalized Additive Modeling approach. (Hydrosphere / Coastal and Reefs)

README

        
---

output: github_document

---

```{r, include = FALSE}

knitr::opts_chunk$set(

  collapse = TRUE,

  comment = "#>",

  fig.path = "man/figures/README-",

  out.width = "100%"

)

```

# baytrends

[![CRAN status](https://www.r-pkg.org/badges/version/baytrends)](https://cran.r-project.org/package=baytrends) 

Windows [![cran checks](https://badges.cranchecks.info/flavor/windows/baytrends.svg)](https://cran.r-project.org/web/checks/check_results_baytrends.html) 

Linux [![cran checks](https://badges.cranchecks.info/flavor/linux/baytrends.svg)](https://cran.r-project.org/web/checks/check_results_baytrends.html) 

OSX [![cran checks](https://badges.cranchecks.info/flavor/macos/baytrends.svg)](https://cran.r-project.org/web/checks/check_results_baytrends.html) 

[![Lifecycle: stable](https://img.shields.io/badge/lifecycle-stable-brightgreen.svg)](https://lifecycle.r-lib.org/articles/stages.html) 

[![Maintenance](https://img.shields.io/badge/Maintained%3F-yes-green.svg)](https://GitHub.com/tetratech/baytrends/graphs/commit-activity)

The baytrends package was developed to enable users to evaluate long-term trends

in the Chesapeake Bay using a Generalized Additive Modeling (GAM) approach. The

model development includes selecting a GAM structure to describe nonlinear 

seasonally-varying changes over time, incorporation of hydrologic variability 

via either a river flow or salinity, the use of an intervention to deal with 

method or laboratory changes suspected to impact data values, and representation

of left- and interval-censored data. This approach, which is fully transferable

to other systems, allows for Chesapeake Bay water quality data to be evaluated 

in a statistically rigorous, yet flexible way to provide insights to a range of 

management- and research-focused questions.

## Installation

The CRAN version of baytrends from [CRAN](https://CRAN.R-project.org) 

can be installed with the code below.

``` r

install.packages("baytrends")

```

In some cases not all dependent packages are available on the user's system.

In these cases installing all dependencies is necessary.

```r

install.packages("baytrends", dependencies = TRUE)

```

The development version (with vignettes) from [GitHub](https://github.com/) 

can be installed with the code example below using the `remotes` package.

``` r

if(!require(remotes)){install.packages("remotes")}  #install if needed

install_github("tetratech/baytrends", force = TRUE, build_vignettes = TRUE)

```