https://github.com/vjcitn/cdnmp2c

Project definitions for pathway to cloud for CDNM
https://github.com/vjcitn/cdnmp2c

computing genetics genomics

Last synced: 11 months ago
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Project definitions for pathway to cloud for CDNM

• Host: GitHub
• URL: https://github.com/vjcitn/cdnmp2c
• Owner: vjcitn
• Created: 2023-05-04T17:36:37.000Z (over 2 years ago)
• Default Branch: main
• Last Pushed: 2023-05-04T17:46:16.000Z (over 2 years ago)
• Last Synced: 2025-01-09T13:46:17.174Z (about 1 year ago)
• Topics: computing, genetics, genomics
• Homepage: https://vjcitn.github.io/CDNMp2c/
• Size: 297 KB
• Stars: 0
• Watchers: 2
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

Awesome Lists containing this project

README

          

## Purpose

Provide general access to use cases for a transition to cloud

computing for a research lab focused on lung disease genetics

and personalized genomic medicine

See the "Get started" and "Articles" tabs above for details.  As a taster, we have

### Carey group

#### BiocHail

We have an R package in Bioconductor that runs through the following

topics (this is just a screenshot, visit [BiocHail at Bioconductor](http://bioconductor.org/packages/release/bioc/vignettes/BiocHail/inst/doc/gwas_tut.html) for the real thing

at Bioconductor for details):

![](man/figures/bhail.jpg)

#### BiocT2T

We want to accelerate adoption of the new telomere-to-telomere

genome reference.  To get the flavor we have an app that looks like:

![](man/figures/t2tapp.jpg)

Full details at VJC's [pkgdown site](https://vjcitn.github.io/BiocT2T)