https://github.com/wolftech-innovations/alphabio
Project AlphaBIO. A medical revolution bound to come.
https://github.com/wolftech-innovations/alphabio
Last synced: 11 months ago
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Project AlphaBIO. A medical revolution bound to come.
- Host: GitHub
- URL: https://github.com/wolftech-innovations/alphabio
- Owner: WolfTech-Innovations
- Created: 2025-03-07T01:19:52.000Z (about 1 year ago)
- Default Branch: main
- Last Pushed: 2025-06-20T17:05:23.000Z (11 months ago)
- Last Synced: 2025-06-20T18:23:29.452Z (11 months ago)
- Language: Python
- Size: 52.7 KB
- Stars: 0
- Watchers: 0
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
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README
## AlphaBIO 2.1.3 - DNA/RNA Manipulation Suite
**AlphaBIO 2.1.3** is a powerful DNA/RNA manipulation tool developed by **WolfTech Innovations**. It provides a terminal-based interface (TUI) for a range of bioinformatics tasks, from basic sequence transcription and mutation to advanced sequence analysis and random sequence generation. With easy-to-use functions for both DNA and RNA sequences, AlphaBIO offers various tools for sequence analysis, mutation introduction, GC content calculation, and more.
### Features:
- **DNA/RNA Transcription**: Transcribe DNA sequences to RNA and vice versa.
- **Mutation Introduction**: Perform point mutations, insertions, and deletions on sequences with customizable probabilities.
- **GC Content Calculation**: Analyze the GC content percentage of a given sequence.
- **Sequence Alignment**: Compare two sequences and highlight matching and mismatching base pairs.
- **Reverse Complement**: Generate reverse complement sequences for DNA and RNA.
- **Random Sequence Generation**: Create random DNA or RNA sequences with customizable GC content and length.
- **Base Counting**: Count the occurrence of each base (A, T/U, C, G) in a sequence.
- **TUI Interface**: Interact with the program through a terminal-based user interface for ease of use.
### Installation:
1. Clone this repository:
```bash
git clone https://github.com/WolfTech-Innovations/AlphaBIO.git
```
2. Navigate to the project folder:
```bash
cd AlphaBIO
```
3. Install dependencies (if any):
```bash
pip install -r requirements.txt
```
### Usage:
To run the program:
```bash
python AlphaBIO.py
```
You will be presented with an interactive menu where you can choose your sequence type (DNA or RNA) and perform various operations like mutation, transcription, reverse complement, and more.
## Creating DNA that binds to and disables the target DNA:
1. Select your sequence type (DNA or RNA).
2. Enter your sequence.
3. Choose operation 9.
4. Check output.txt
#### Contributions:
If you'd like to contribute to this project, please fork this repository, make changes, and submit a pull request!
#### License:
This project is licensed under the GPL License.
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