https://github.com/rsusik/cf2

Approximate pattern matching with Counting Filter on q-grams using SSE instructions (CF2)

algorithm approximate approximate-pattern-matching counting-filter dna dna-inversion dna-sequences dna-translocation edit-distance filtration hamming levenshtein matching pattern research simd simd-instructions sse text-matching text-search

Last synced: 15 Jun 2025