Projects in Awesome Lists tagged with hubmap
A curated list of projects in awesome lists tagged with hubmap .
https://github.com/hms-dbmi/viv?tab=readme-ov-file
Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.
gehlenborglab hubmap imaging ome-tiff openmicroscopy viv zarr
Last synced: 21 Mar 2025
https://github.com/vitessce/vitessce
Vitessce is a visual integration tool for exploration of spatial single-cell experiments.
data-visualization gehlenborglab hidivelab hubmap imaging kharchenkolab single-cell vitessce zarr
Last synced: 14 Apr 2025
https://github.com/chrise96/weighted-masks-fusion
Weighted Masks Fusion (WMF) - Ensembling for Instance Segmentation.
ensemble fusion hubmap kaggle kaggle-competition mask segmentation-models wbf yolov8
Last synced: 18 Jan 2026
https://github.com/vitessce/vitessce-data
Utils for loading HuBMAP data formats
gehlenborglab hidivelab hubmap imaging kharchenkolab omics single-cell spatial vitessce
Last synced: 08 Apr 2025