Projects in Awesome Lists tagged with microbial
A curated list of projects in awesome lists tagged with microbial .
https://github.com/genomic-medicine-sweden/jasen
Bacterial typing pipeline for clinical NGS data. Written in NextFlow, Python & Bash.
clinical microbial pipeline resistance typing
Last synced: 17 Jan 2026
https://github.com/clinical-genomics/microsalt
Microbial Sequence Analysis and Loci-based Typing pipeline for use on NGS WGS data.
clinical microbial pipeline resistance typing
Last synced: 15 Aug 2025
https://github.com/muellsen/mna
MATLAB scripts and functions for Microbial Network Analysis (MNA)
graphlets microbial microbiome networks
Last synced: 10 Oct 2025
