Ecosyste.ms: Awesome
An open API service indexing awesome lists of open source software.
https://github.com/pytask-dev/pytask
pytask is a workflow management system that facilitates reproducible data analyses.
pytask reproducible-research scientific-workflows
Last synced: 16 Apr 2024
![](https://github.com/pytask-dev.png)
https://github.com/JoeriHermans/awflow
Reproducible research and reusable acyclic workflows in Python. Execute code on HPC systems as if you executed them on your personal computer!
automation hpc hpc-tools python reproducible-research reproducible-science slurm workflow workflow-engine
Last synced: 16 Apr 2024
![](https://github.com/JoeriHermans.png)
https://github.com/ctuning/ctuning-programs
Collective Knowledge extension with unified and customizable benchmarks (with extensible JSON meta information) to be easily integrated with customizable and portable Collective Knowledge workflows. You can easily compile and run these benchmarks using different compilers, environments, hardware and OS (Linux, MacOS, Windows, Android). More info:
c collaborative-benchmarking collaborative-optimization collective-knowledge common-benchmarks cpp crowd-benchmarking crowd-tuning cuda customizable-benchmarking fortran json-api json-metadata open-benchmarks opencl reproducible-research reproducible-workflows
Last synced: 08 Apr 2024
![](https://github.com/ctuning.png)
https://github.com/research-software-directory/research-software-directory
The Research Software Directory is a content management system that is tailored to software.
discoverability fair-for-software reproducible-research research-software-engineering
Last synced: 04 Apr 2024
![](https://github.com/research-software-directory.png)
https://github.com/ReproNim/neurodocker
Generate custom Docker and Singularity images, and minimize existing containers
apptainer containers docker dockerfile linux neuroscience nipype reproducible-research science singularity-container
Last synced: 01 Apr 2024
![](https://github.com/ReproNim.png)
https://github.com/INRIA/awesome-open-science-software
awesome open list of pointers about open science for software and computational science
computational-science open-science reproducible-experiments reproducible-research
Last synced: 31 Mar 2024
![](https://github.com/INRIA.png)
https://github.com/wenbihan/reproducible-image-denoising-state-of-the-art
Collection of popular and reproducible image denoising works.
art arxiv benchmarking cnn curated-list deep-learning denoising-algorithms image-denoising image-processing image-reconstruction image-restoration implementation inverse-problems noise noise-reduction performance-analysis recovery-image reproducible-research state-of-the-art summary
Last synced: 31 Mar 2024
![](https://github.com/wenbihan.png)
https://github.com/mmasana/FACIL
Framework for Analysis of Class-Incremental Learning with 12 state-of-the-art methods and 3 baselines.
continual-learning deep-learning framework incremental-learning lifelong-learning machine-learning reproducible-research survey
Last synced: 27 Mar 2024
![](https://github.com/mmasana.png)
https://github.com/o2r-project/containerit
Package an R workspace and all dependencies as a Docker container
docker dockerfile r reproducible-research reproducible-science
Last synced: 26 Mar 2024
![](https://github.com/o2r-project.png)
https://github.com/Cloud-CV/EvalAI
:cloud: :rocket: :bar_chart: :chart_with_upwards_trend: Evaluating state of the art in AI
ai ai-challenges angular7 angularjs artificial-intelligence challenge django docker evalai evaluation leaderboard machine-learning python reproducibility reproducible-research
Last synced: 23 Mar 2024
![](https://github.com/Cloud-CV.png)
https://github.com/MaurizioFD/RecSys2019_DeepLearning_Evaluation
This is the repository of our article published in RecSys 2019 "Are We Really Making Much Progress? A Worrying Analysis of Recent Neural Recommendation Approaches" and of several follow-up studies.
bpr bprmf bprslim collaborative-filtering content-based-recommendation deep-learning evaluation-framework funksvd hybrid-recommender-system hyperparameters knn matrix-completion matrix-factorization neural-network recommendation-algorithms recommendation-system recommender-system reproducibility reproducible-research slimelasticnet
Last synced: 22 Mar 2024
![](https://github.com/MaurizioFD.png)
https://github.com/recipy/recipy
Effortless method to record provenance in Python
database provenance python recipy reproducible-research science
Last synced: 21 Mar 2024
![](https://github.com/recipy.png)
https://github.com/ekstroem/dataMaid
An R package for data screening
data-cleaning data-screening reproducible-research
Last synced: 21 Mar 2024
![](https://github.com/ekstroem.png)
https://github.com/jpgmv1998/reproducible_paper_template
Template repository for starting a new empirical paper project implementing good practices for reproducibility using R
economics empirical-research reproducible-research template
Last synced: 21 Mar 2024
![](https://github.com/jpgmv1998.png)
https://github.com/o2r-project/ctv-computational-environments
A CRAN task view for computational environments and reproducibility
ctv open-science r r-task-view reproducible-research reproducible-science rstats
Last synced: 21 Mar 2024
![](https://github.com/o2r-project.png)
https://github.com/ClaudioZandonella/trackdown
R package for collaborative writing and editing of R Markdown (or Sweave) documents in Google Docs.
markdown r r-package reproducible-research rstats
Last synced: 21 Mar 2024
![](https://github.com/ClaudioZandonella.png)
https://github.com/AthenaEPI/dmipy
The open source toolbox for reproducible diffusion MRI-based microstructure estimation
axcaliber ball-and-racket ball-and-stick constrained-spherical-deconvolution diffusion-mri diffusion-time-dependence microscopic-diffusion-imaging microstructure-estimation microstructure-imaging-in-crossings multi-compartment-modeling multi-echo-time multi-shell multi-tissue-csd neuroimaging neuroscience noddi noddi-bingham optimization reproducible-research spherical-mean-technique
Last synced: 21 Mar 2024
![](https://github.com/AthenaEPI.png)
https://github.com/basiralab/RG-Select
Quantifying the Reproducibility of Graph Neural Networks using Multigraph Brain Data
brain-connectivity classification deep-learning diffpool gcn graph-attention-networks graph-convolutional-networks graph-neural-networks multigraph network-neuroscience reproducibility reproducible-research reproducible-science sag
Last synced: 21 Mar 2024
![](https://github.com/basiralab.png)
https://github.com/AllenInstitute/openscope_databook
OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁🧠🔬🖥️📈
dandi-archive data-analysis data-visualization nwb python reproducible-research visualization
Last synced: 21 Mar 2024
![](https://github.com/AllenInstitute.png)
https://github.com/o2r-project/o2r-UI
User interface for creating and examining Executable Research Compendia (ERC)
Last synced: 21 Mar 2024
![](https://github.com/o2r-project.png)
https://github.com/o2r-project/architecture
Architecture and overarching documentation for o2r microservices
erc reproducible-experiments reproducible-research reproducible-science
Last synced: 21 Mar 2024
![](https://github.com/o2r-project.png)
https://github.com/dlab-berkeley/R-package-development
R package development workshop
open-source-project package r reproducible-research
Last synced: 19 Mar 2024
![](https://github.com/dlab-berkeley.png)
https://github.com/hakyimlab/ukbrest
ukbREST: efficient and streamlined data access for reproducible research of large biobanks
biobank reproducibility reproducible-research reproducible-science uk-biobank
Last synced: 17 Mar 2024
![](https://github.com/hakyimlab.png)
https://github.com/danieldeutsch/repro
Repro is a library for easily running code from published papers via Docker.
docker machine-learning nlp reproducibility reproducible-research
Last synced: 17 Mar 2024
![](https://github.com/danieldeutsch.png)