Projects in Awesome Lists by BaranziniLab
A curated list of projects in awesome lists by BaranziniLab .
https://github.com/baranzinilab/kg_rag
Empower Large Language Models (LLM) using Knowledge Graph based Retrieval-Augmented Generation (KG-RAG) for knowledge intensive tasks
bert-models bioinformatics bioinformatics-algorithms biomedical-applications biomedical-informatics context-aware gpt gpt35turbo gpt4 knowledge-base knowledge-graph large-language-models llama llama2 llm prompt-engineering prompt-tuning rag retrieval-augmented-generation sentence-transformers
Last synced: 04 Oct 2025
https://github.com/BaranziniLab/KG_RAG
Empower Large Language Models (LLM) using Knowledge Graph based Retrieval-Augmented Generation (KG-RAG) for knowledge intensive tasks
bert-models bioinformatics bioinformatics-algorithms biomedical-applications biomedical-informatics context-aware gpt gpt35turbo gpt4 knowledge-base knowledge-graph large-language-models llama llama2 llm prompt-engineering prompt-tuning rag retrieval-augmented-generation sentence-transformers
Last synced: 24 Mar 2025
https://github.com/baranzinilab/sars-cov-2-molecular-explorer
This repository contains bioinformatic work from my lab in response to the COVID-19 pandemic.
Last synced: 05 Mar 2026
https://github.com/baranzinilab/tandem
This repository holds the code for TANDEM model
Last synced: 14 Jul 2025
https://github.com/baranzinilab/vane
Variant Annotation with Network-enhanced Epigenetic data
Last synced: 16 Jul 2025
https://github.com/baranzinilab/imsgc_federated
CLI python scripts for federated analysis
Last synced: 29 Jun 2025
https://github.com/baranzinilab/rnaseq_quantseq_fancy
QuantSeq 3'mRNAseq data analysis
Last synced: 23 Nov 2025
https://github.com/baranzinilab/ehr-ranges
ipynb for generating EHR lab ranges from patient data
Last synced: 27 Feb 2025