Ecosyste.ms: Awesome
An open API service indexing awesome lists of open source software.
Projects in Awesome Lists by DD-DeCaF
A curated list of projects in awesome lists by DD-DeCaF .
https://github.com/dd-decaf/tutorials
Teaching materials for cobrapy, cameo, escher and DD-DeCaF
Last synced: 09 Nov 2024
https://github.com/dd-decaf/id-mapper
ID mapper for biological entities (metabolites, reactions, genes, etc)
Last synced: 09 Nov 2024
https://github.com/dd-decaf/caffeine-vue
Caffeine frontend, a state-of-the-art web platform which puts model-guided and data-driven design into practice in industrial biotechnology.
Last synced: 04 Jan 2025
https://github.com/DD-DeCaF/caffeine-vue
Caffeine frontend, a state-of-the-art web platform which puts model-guided and data-driven design into practice in industrial biotechnology.
Last synced: 11 Nov 2024
https://github.com/dd-decaf/cookiecutter-flask-microservice
A cookiecutter template for creating microservices with Flask-RESTPlus.
Last synced: 04 Jan 2025
https://github.com/dd-decaf/memote-service-frontend
Vue single page application for uploading models and viewing reports.
Last synced: 04 Jan 2025
https://github.com/dd-decaf/caffeine-tombstone
Placeholder website with information on what happened to Caffeine
Last synced: 04 Jan 2025
https://github.com/dd-decaf/metabolic-ninja
Predict heterologous pathways for the given organism and chemical of interest
Last synced: 04 Jan 2025
https://github.com/dd-decaf/pip-compile
A minimal Docker image that provides pip-tools in order to lock Python dependencies.
Last synced: 04 Jan 2025
https://github.com/dd-decaf/modeling-base
Base Docker image(s) for metabolic modeling with proprietary solvers.
Last synced: 04 Jan 2025
https://github.com/dd-decaf/contributions
Measure code contributions to a GitHub organization's repositories.
Last synced: 04 Jan 2025
https://github.com/dd-decaf/acme-challenge
A simple static file server to answer let's encrypt challenges for our domains.
Last synced: 04 Jan 2025
https://github.com/dd-decaf/bigg-proxy
Simple nginx proxy in and the corresponding Dockerfile to relay calls securely to the bigg API
Last synced: 04 Jan 2025
https://github.com/dd-decaf/wsgi-base
Base Docker image(s) for WSGI microservices in the DD-DeCaF organization
Last synced: 04 Jan 2025
https://github.com/dd-decaf/warehouse
The storage for the experimental data used for modeling: omics, strains, media etc
Last synced: 04 Jan 2025
https://github.com/dd-decaf/postgres-base
Base Docker image for WSGI microservices with postgres dependencies.
Last synced: 04 Jan 2025
https://github.com/dd-decaf/docs
The documentation of DD-DeCaF platform (infrastructure and dependencies)
Last synced: 04 Jan 2025
https://github.com/dd-decaf/tag-spy-docker
Provide the tag-spy tool in a minimal Python 3.7 Docker image.
Last synced: 04 Jan 2025
https://github.com/dd-decaf/cookiecutter-python-library
A cookiecutter based on cookiecutter-pypackage for python packages in DD-DeCaF
Last synced: 04 Jan 2025
https://github.com/dd-decaf/process-engine
Tool for performing long-running computations based on Resolwe
Last synced: 04 Jan 2025
https://github.com/dd-decaf/model-storage
The storage for metabolic models used by the platform
Last synced: 04 Jan 2025
https://github.com/dd-decaf/simulations
Model service which takes care of adjusting model according to incoming messages and returns information such as fluxes, theoretical maximum yields, etc
Last synced: 04 Jan 2025
https://github.com/dd-decaf/camilo
helper package for using cameo with data
Last synced: 04 Jan 2025
https://github.com/dd-decaf/tag-spy
Identify the latest DD-DeCaF tag on a particular Docker image.
docker docker-image docker-tags tag
Last synced: 13 Dec 2024