https://github.com/helenalc/muscat

Multi-sample multi-group scRNA-seq analysis tools

Last synced: 15 May 2025

https://github.com/helenalc/catalyst

Cytometry dATa anALYsis Tools

Last synced: 16 May 2025

https://github.com/helenalc/spatialdata

Last synced: 09 Mar 2026

https://github.com/helenalc/simulation-comparison

Snakemake workflow to benchmark scRNA-seq data simulators

benchmark scrna-seq simulation snakemake

Last synced: 21 Sep 2025

https://github.com/helenalc/muscat-comparison

Last synced: 23 Jan 2026

https://github.com/helenalc/tenxvisiumdata

Collection of 10X Genomics Visium spatial gene expression datasets

Last synced: 26 Oct 2025

https://github.com/helenalc/spatialdata.plot

Viz. for `SpatialData`

Last synced: 04 Sep 2025

https://github.com/helenalc/helenalc.github.io

Last synced: 21 Sep 2025

https://github.com/helenalc/cosmx-smi-ibd

Last synced: 31 Oct 2025

https://github.com/helenalc/bc2_2019-workshop_multi-scrna-seq

Last synced: 10 Feb 2026

https://github.com/helenalc/type-state

Last synced: 14 May 2025

https://github.com/helenalc/biocspatialchallenges

Last synced: 24 Jan 2026

https://github.com/helenalc/sib-introduction-to-r-shiny

SIB Introductory course to R Shiny

Last synced: 21 Jan 2026

https://github.com/helenalc/vespa

Utils for visualization & analysis of spatially-resolved transcriptomics data

Last synced: 08 Oct 2025

https://github.com/helenalc/spatialdata.book

BiocBook

Last synced: 22 Feb 2026

https://github.com/helenalc/bioc2019-workshop_multi-scrna-seq

Last synced: 09 Feb 2026

https://github.com/helenalc/prummel_et_al-hand2_lpm

Last synced: 26 Jun 2025

https://github.com/helenalc/muscdata

Multi-sample multi-group scRNA-seq datasets

Last synced: 14 May 2025

https://github.com/helenalc/miro

Last synced: 07 Mar 2026

https://github.com/helenalc/msc-thesis

Last synced: 14 May 2025

https://github.com/helenalc/spatialdata.data

Last synced: 26 Oct 2025

https://github.com/helenalc/principled-components

Last synced: 14 May 2025