https://github.com/structuralneurobiologylab/syconn

Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.

connectivity-matrix connectomics image-analysis image-processing morphology-analysis semantic-segmentation

Last synced: 17 Mar 2026

https://github.com/structuralneurobiologylab/autodoc

This is a repository for automatic generation of docstrings

Last synced: 17 Mar 2026

https://github.com/structuralneurobiologylab/banis

BANIS: Baseline for Affinity-based Neuron Instance Segmentation

Last synced: 17 Mar 2026

https://github.com/structuralneurobiologylab/morphx

Toolkit for exploration and segmentation of 3D morphologies.

Last synced: 17 Mar 2026

https://github.com/structuralneurobiologylab/syconn-neuroglancer

Adaptation of the WebGL-based volumetric viewer https://github.com/google/neuroglancer. Provides an analysis interface for filtering neurons based on properties, the identification of pre- and postsynaptic neurons or the listing of different cell types

python3 typescript webgl

Last synced: 17 Mar 2026

https://github.com/structuralneurobiologylab/moss

Microscopy Oriented Segmentation with Supervision

Last synced: 17 Mar 2026

https://github.com/structuralneurobiologylab/areax-connectomic-analysis

Code to analyse connectomic datasets that are processed with SyConn

Last synced: 17 Mar 2026

https://github.com/structuralneurobiologylab/beach_collection

Last synced: 17 Mar 2026

https://github.com/structuralneurobiologylab/syconn2scripts

Last synced: 17 Mar 2026

https://github.com/structuralneurobiologylab/deepfocus

Last synced: 17 Mar 2026

https://github.com/structuralneurobiologylab/nisb

Last synced: 17 Mar 2026