Projects in Awesome Lists by TorkamaniLab
A curated list of projects in awesome lists by TorkamaniLab .
https://github.com/torkamanilab/metapipe
A pipeline generator and runtime system
Last synced: 08 Oct 2025
https://github.com/TorkamaniLab/metapipe
A pipeline generator and runtime system
Last synced: 15 May 2025
https://github.com/torkamanilab/zoish
Zoish is a Python package that streamlines machine learning by leveraging SHAP values for feature selection and interpretability, making model development more efficient and user-friendly
automl data-science feature-engineering feature-selection machine-learning python scikit-learn
Last synced: 10 Apr 2025
https://github.com/torkamanilab/genotype_imputation_pipeline
Final version of the pipeline for processing TOPMED and other dbGaP datasets, includes: automatic identification of reference genome build and selection of correct chain file, mapping to GRCh37 reference build, initial quality control, ancestry analysis, post-ancestry quality control, phasing, imputation, post-imputation quality control.
Last synced: 04 Jan 2026
https://github.com/torkamanilab/lohrasb
This versatile tool streamlines hyperparameter optimization in machine learning workflows.
Last synced: 08 Oct 2025
https://github.com/torkamanilab/imputation_autoencoder
Deep learning algorithm for imputation of genetic variants
Last synced: 08 Oct 2025
https://github.com/torkamanilab/carotid.art.dis.scrna_seq
Code Files For Analyzing 3 Patient Carotid Artery Single Cell RNA-Seq Experiment
Last synced: 09 Jul 2025
https://github.com/torkamanilab/frequency_analyzer
A command-line tool for isolating frequencies found in accelerometer data.
Last synced: 15 Oct 2025
https://github.com/torkamanilab/slack-hubot-docker
Docker image for running Hubot with Slack
Last synced: 10 May 2026
https://github.com/torkamanilab/cad_meta_prediction
Machine learning pipeline for meta-prediction of coronary artery disease
Last synced: 21 Mar 2025
https://github.com/torkamanilab/genome-tiling
A Set of R Tools for Splitting up Chromosomes into Regions of High and Low Recombination
Last synced: 21 Mar 2025
https://github.com/torkamanilab/cec
R scripts for circulating endothelial project
Last synced: 21 Mar 2025
https://github.com/torkamanilab/sparse.cor
R package for calculating sparse correlations
Last synced: 21 Mar 2025
https://github.com/torkamanilab/ncbi-scraper
A python library for parsing data from NCBI website
Last synced: 21 Mar 2025
https://github.com/torkamanilab/python_data_science_internship
Python learning for data science on analyzing the speed and accuracy of the imputation model (autoencoder)
Last synced: 05 Oct 2025
https://github.com/torkamanilab/gadget-pipeline
An analysis pipeline used to classify ET vs. PD tremor based on wrist-mounted accelerometer data.
Last synced: 30 Oct 2025
https://github.com/torkamanilab/scripps-auth
A simple key-pair-based token authentication library
Last synced: 16 May 2026