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Projects in Awesome Lists by bionanoimaging

A curated list of projects in awesome lists by bionanoimaging .

https://github.com/bionanoimaging/fouriertools.jl

Tools for working with Fourier space.

arrays fft fourier imageprocessing interpolation julia

Last synced: 15 Nov 2024

https://github.com/bionanoimaging/scalable-angular-spectrum-method-sas

Implementations of the Scalable Angular Spectrum Method

Last synced: 16 Nov 2024

https://github.com/bionanoimaging/tiledviews.jl

Allows an AbstractArray, to look like an AbstractArray with one more dimension and the tiles are represented along this dimension.

Last synced: 08 Nov 2024

https://github.com/bionanoimaging/indexfunarrays.jl

Fun with indices (and functions on them)

array julia julia-language

Last synced: 11 Oct 2024

https://github.com/bionanoimaging/separablefunctions.jl

Calculates multidimensional functions faster by exploiting their separability.

Last synced: 08 Nov 2024

https://github.com/bionanoimaging/view5d

An image viewer for up to 5-dim data www.nanoimaging.de/View5D

Last synced: 08 Nov 2024

https://github.com/bionanoimaging/introduction_image_processing_julia

Material for 6th NORMIC Image Processing Workshop

Last synced: 08 Nov 2024

https://github.com/bionanoimaging/cellstorm-tensorflow

Image-to-Image network to localize dSTORM events in Tensorflow. Publication link: https://arxiv.org/abs/1804.06244

Last synced: 08 Nov 2024

https://github.com/bionanoimaging/beamerscope_matlab

This is a repository for a 3D printed DIY microscope with a structured illumination using a LED video-projector and an Android Cellphone. This is the MATLAB Code to create a machine learning dataset from phasecontrast images and its corresponding optimized illumination sources.

Last synced: 08 Nov 2024

https://github.com/bionanoimaging/ndtools.jl

A lightweight package for utility functions for working with multi-dimensional data

Last synced: 08 Nov 2024

https://github.com/bionanoimaging/bionanoimaging.github.io

Repository for hosting the website files

heintzmann jena microscopy physics

Last synced: 08 Nov 2024

https://github.com/bionanoimaging/cellstorm-android

Application to readout BW-frames from HUAWEI derived from Camera2RAW and FreedCAM

Last synced: 08 Nov 2024

https://github.com/bionanoimaging/cellstorm-pytorch

Code to train the image enhancement for the cellSTORM approach

Last synced: 08 Nov 2024

https://github.com/bionanoimaging/cellstorm_tensorflow

This is the APP to localize dSTORM experiments using an Android cellphone and an image-to-image GAN

Last synced: 08 Nov 2024

https://github.com/bionanoimaging/tensorflow_multiplescattering

Repo to compare different single/multiple scattering algorithms computationally.

Last synced: 08 Nov 2024

https://github.com/bionanoimaging/psfdistiller.jl

Distills a point spread function (PSF) from a measurement of beads by selecting local maxima that are separate enough from other ones.

Last synced: 08 Nov 2024

https://github.com/bionanoimaging/beamerscope-android

Beamerscope-ANDROID

Last synced: 08 Nov 2024

https://github.com/bionanoimaging/beamerscope_tensorflow

This creates a Tensorflow Graph for the automaized illumination detection.

Last synced: 08 Nov 2024

https://github.com/bionanoimaging/nanoimagingpack

Python pack for nanoimaging-related tasks

Last synced: 08 Nov 2024

https://github.com/bionanoimaging/psftoolbox-matlab

Includes various ways to calculate point spread functions (PSFs) with a focus on high NA fluorescence microscopy.

Last synced: 08 Nov 2024

https://github.com/bionanoimaging/cellstorm-matlab

Code to generate datasets for the cellSTORM approach

Last synced: 08 Nov 2024

https://github.com/bionanoimaging/cameracalibration

This is a Napari Plugin that calibrates your camera w.r.t. readnoise and gain

Last synced: 08 Nov 2024

https://github.com/bionanoimaging/beamerscope_cad

Learn to illuminate with an optimized light-source shape. This is the CAD Repository for the projector based cellphone microscope which is benefitting from the light source.

Last synced: 08 Nov 2024

https://github.com/bionanoimaging/khorosbinlin64

binaries for the khoros-inspired c-helpers

Last synced: 08 Nov 2024

https://github.com/bionanoimaging/smartlense

Android Application for controlling a LED-Matrix of a 3D-printed Microscope Framework.

Last synced: 08 Nov 2024

https://github.com/bionanoimaging/juliaconvolutionperformance

Performance comparison of different convolution approaches

Last synced: 08 Nov 2024

https://github.com/bionanoimaging/beamerscope-mldataset

A small set from the Dataset to learn the best light-source shape.

Last synced: 08 Nov 2024

https://github.com/bionanoimaging/discoverepidemicmodel.jl

With this repo we provide a toolbox for automatic model discovery in epidemiology. We therefor start with Sars-CoV-2 modelling.

Last synced: 08 Nov 2024