Data

Tools

Indexes

Applications

Experiments

Awesome

An open API service indexing awesome lists of open source software.

Projects in Awesome Lists by ctlab

A curated list of projects in awesome lists by ctlab .

https://github.com/ctlab/itmo_fs

Feature selection library in python

feature-selection machine-learning

Last synced: 30 Oct 2025

https://github.com/ctlab/ITMO_FS

Feature selection library in python

feature-selection machine-learning

Last synced: 08 May 2025

https://github.com/ctlab/gadma

Genetic Algorithm for Demographic Model Analysis

Last synced: 30 Oct 2025

https://github.com/ctlab/linseed

Linseed: LINear Subspace identification for gene Expresion Deconvolution

Last synced: 30 Oct 2025

https://github.com/ctlab/metafast

Fast metagenome analysis toolkit

Last synced: 30 Oct 2025

https://github.com/ctlab/metafx

MetaFX – library for feature extraction from whole-genome metagenome sequencing data

bioinformatics feature-extraction metagenomics

Last synced: 30 Oct 2025

https://github.com/ctlab/gatom

Finding an Active Metabolic Module in Atom Transition Network

Last synced: 20 Feb 2026

https://github.com/ctlab/samovar

Algorithms package for generating model metagenomes with specified properties

artificial-data metagenomics

Last synced: 30 Oct 2025

https://github.com/ctlab/mcmcranking

Tool To Solve The Active Module Problem

Last synced: 30 Oct 2025

https://github.com/ctlab/scnavigator

Single Cell Navigator

Last synced: 30 Oct 2025

https://github.com/ctlab/parallel-rearrangements

parallel rearrangements caller

Last synced: 30 Oct 2025

https://github.com/ctlab/sgmwcs-solver

CPLEX-based solver for signal generalized maximum weight connected subgraph problem

Last synced: 30 Oct 2025

https://github.com/ctlab/shiny-graph

Graph module for R Shiny

Last synced: 30 Oct 2025

https://github.com/ctlab/scn-pipeline

scNavigator processing pipeline for scRNA-seq data

Last synced: 30 Oct 2025

https://github.com/ctlab/itmo-assembler

ITMO Genome Assembler

bioinformatics genome-assembly

Last synced: 30 Oct 2025

https://github.com/ctlab/virgo-solver

Solver for SGMWCS and GMWCS problems

Last synced: 30 Oct 2025

https://github.com/ctlab/shinygatom

Web-service for omics-based identification of regulated metabolic modules in atom transition networks

Last synced: 30 Oct 2025

https://github.com/ctlab/evoguess

Component EvoGuess v2.1 for finding decomposition sets and estimating hardness of SAT instances.

Last synced: 30 Oct 2025

https://github.com/ctlab/gshell

Last synced: 30 Oct 2025

https://github.com/ctlab/recast

RECAST (Recipient intestinE Colonisation AnalysiS Tool)

bioinformatics metagenomics

Last synced: 23 Jun 2026

https://github.com/ctlab/transcriptome

Transcriptome assembler

Last synced: 30 Oct 2025

https://github.com/ctlab/quant3p

A set of scripts for 3' RNA-seq quantification

Last synced: 30 Oct 2025

https://github.com/ctlab/itmo_parsat

Probabilistic backdoor trees for SAT solving

Last synced: 30 Oct 2025

https://github.com/ctlab/gmwcs-solver

Last synced: 30 Oct 2025

https://github.com/ctlab/immgenopensource

scripts for RNAseq data processing by GAM-clustering

Last synced: 24 Feb 2026

https://github.com/ctlab/dadi_adjoint_state

The adjoint-state method for demographic inference

Last synced: 13 Jun 2026

https://github.com/ctlab/genequery-presentation

Beamer GeneQuery presentation

Last synced: 22 Feb 2026

https://github.com/ctlab/beepp2bee

BEE++ to BEE translator

Last synced: 30 Oct 2025

https://github.com/ctlab/hict_library

Library for interaction with Hi-C contact maps in HDF5 format

Last synced: 13 Jun 2026

https://github.com/ctlab/genequery-java

Java modules for GeneQuery: commons, REST backend, console version, etc.

Last synced: 30 Oct 2025

https://github.com/ctlab/hict_webui

Last synced: 30 Oct 2025