https://github.com/ddofer/ProFET

ProFET: Protein Feature Engineering Toolkit for Machine Learning

Last synced: 19 Jul 2025

https://github.com/ddofer/profet

ProFET: Protein Feature Engineering Toolkit for Machine Learning

Last synced: 29 Jul 2025

https://github.com/ddofer/asap

Amino-Acid Sequence Annotation Predictor (ASAP)

Last synced: 29 Jul 2025

https://github.com/ddofer/talk

Slides and talks from presentations, workshops, etc'

Last synced: 26 Mar 2025

https://github.com/ddofer/cah

Code used for Cards Against Humanity EMNLP paper

cards-against-humanity humor-classification machine-learning nlp

Last synced: 21 Jul 2025

https://github.com/ddofer/trends

Code & datasets for "What’s next? Forecasting scientific research trends"

Last synced: 24 Oct 2025

https://github.com/ddofer/proteinhumvir

Code & data for "Protein Language Models Expose Viral Mimicry and Immune Escape"

Last synced: 29 Jul 2025

https://github.com/ddofer/opentargets-diseasesubtype

Discovery of disease Subtypes in Open Targets

Last synced: 26 Mar 2025

https://github.com/ddofer/ml

Machine Learning & research side-projects

Last synced: 13 Jun 2025

https://github.com/ddofer/neuropid

NeuroPID is a prediction tool for Neuropeptide Precursor (NPP) and Neuromodulator Proteins. NeuroPID provides a list of candidate NPPs and neuromodulators at a genomic scale from unexplored proteomes using protein FASTA sequences as input.

Last synced: 19 Mar 2026

https://github.com/ddofer/hack

Hackathon code & tricks

Last synced: 26 Aug 2025

https://github.com/ddofer/booking-challenge

Booking.com Challenge - WebTour 2021 - ACM WSDM - ML Code

Last synced: 26 Mar 2025

https://github.com/ddofer/proteinbert

Protein language models using attention models

bioinformatics cafa deep-learning deep-neural-networks language-model machine-learning proteomics

Last synced: 26 Oct 2025

https://github.com/ddofer/hw

Homework public repo

Last synced: 26 Mar 2025

https://github.com/ddofer/pipr

Last synced: 06 Feb 2026

https://github.com/ddofer/proteina

Data

Last synced: 03 Feb 2026

https://github.com/ddofer/kaggle-ml

Kaggle material and code. Owned by Dan Ofer. Used for the Huji ML and data science team(s)

Last synced: 04 Feb 2026

https://github.com/ddofer/ddofer.github.io

Dan's Blog

blog cv data data-science machine-learning

Last synced: 12 Aug 2025

https://github.com/ddofer/kaggle-huji-ml

Kaggle Competitions code, for the HUJI Data science team. By Dan Ofer

Last synced: 26 Mar 2025