Projects in Awesome Lists by dynverse
A curated list of projects in awesome lists by dynverse .
https://github.com/dynverse/dyngen
Simulating single-cell data using gene regulatory networks 📠
benchmarking single-cell single-cell-analysis single-cell-omics
Last synced: 17 Mar 2026
https://github.com/dynverse/dynverse
A set of tools supporting the development, execution, and benchmarking of trajectory inference methods. 🌍
benchmarking scrna-seq single-cell single-cell-omics single-cell-rna-seq trajectory-inference-methods
Last synced: 24 Dec 2025
https://github.com/dynverse/anndata
Annotated multivariate observation data in R
Last synced: 21 Feb 2026
https://github.com/dynverse/dynplot
Visualising single-cell trajectories, including comparisons between two models 📈
trajectory-inference visualisation
Last synced: 22 Oct 2025
https://github.com/dynverse/babelwhale
Talking to Docker and Singularity containers
Last synced: 18 Feb 2026
https://github.com/dynverse/dynwrap
A common data format and inference environment for single-cell trajectories 📦
Last synced: 19 Feb 2026
https://github.com/dynverse/dynguidelines
Selecting the optimal trajectory inference based on a given dataset and user input 🔮
Last synced: 24 Dec 2025
https://github.com/dynverse/dynbenchmark_results
Contains the results from the dynbenchmark evaluation, see https://github.com/dynverse/dynbenchmark
Last synced: 13 Mar 2026
https://github.com/dynverse/dynutils
Common Functionality for the 'dynverse' Packages
Last synced: 23 Feb 2026
https://github.com/dynverse/travis_scripts
Helper scripts for testing containers on Travis
Last synced: 05 Jun 2026
https://github.com/dynverse/competition
Topcoder single-cell trajectory inference competition
Last synced: 28 May 2026
https://github.com/dynverse/dyncli
CLI helper package for creating TI containers
Last synced: 28 May 2026
https://github.com/dynverse/dynwrap_tester
Small example TI method within a docker
Last synced: 27 May 2026
https://github.com/dynverse/travis_package_cacher
Helper repository to make daily caches of dynverse packages
Last synced: 27 May 2026
https://github.com/dynverse/dynclipy
Tiny wrapper for python around dynwrap/dyncli for python
Last synced: 28 May 2026
https://github.com/dynverse/dynsite
Generator for the dynverse website at dynverse.github.io
Last synced: 12 Mar 2026
https://github.com/dynverse/dynmethods_automated_testing
Automated testing results of dynmethods at https://dynverse.github.io/dynmethods_automated_testing/index.html
Last synced: 12 Mar 2026
https://github.com/dynverse/dynfeature
Extracting relevant features from single-cell trajectories 🎯
Last synced: 22 Oct 2025