Ecosyste.ms: Awesome
An open API service indexing awesome lists of open source software.
Projects in Awesome Lists by iskandr
A curated list of projects in awesome lists by iskandr .
https://github.com/iskandr/fancyimpute
Multivariate imputation and matrix completion algorithms implemented in Python
Last synced: 19 Dec 2024
https://github.com/iskandr/moving_pictures
Create a movie from a sequence of images in Python (uses PIL and ffmpeg)
Last synced: 07 Nov 2024
https://github.com/iskandr/knnimpute
Python implementations of kNN imputation
imputation machine-learning missing-data statistics
Last synced: 07 Nov 2024
https://github.com/iskandr/shiver
A multi-threaded work queue for LLVM functions
Last synced: 14 Oct 2024
https://github.com/iskandr/genepool
Framework for writing evolutionary optimization algorithms in OCaml
Last synced: 14 Oct 2024
https://github.com/iskandr/texture_synthesis
Repetitive pretty pictures on demand
Last synced: 01 Dec 2024
https://github.com/iskandr/parakeet-retired
Parallelizing Runtime for Array Languages
Last synced: 14 Oct 2024
https://github.com/iskandr/arma
Estimating ARMA model parameters using stochastic gradient descent
Last synced: 14 Oct 2024
https://github.com/iskandr/immuno
Predicting immunogenicity of short peptides
Last synced: 01 Dec 2024
https://github.com/iskandr/adversarial-impute
Possibly ill-fated experimented with Generative Adversarial Imputation
Last synced: 01 Dec 2024
https://github.com/iskandr/censored_regression
Linear regression with lower-bound labels
Last synced: 01 Dec 2024
https://github.com/iskandr/brainmets
Survival prediction for brain metastases
Last synced: 01 Dec 2024
https://github.com/iskandr/attention-in-neural-networks
Code for Miami ML meetup on Attention in Neural Networks
Last synced: 01 Dec 2024
https://github.com/iskandr/bytestar
Analyze Python bytecode using an SSA control flow graph representation
Last synced: 01 Dec 2024
https://github.com/iskandr/ml-experiments
Experiments with Jax, PyTorch and variable length sequence models
Last synced: 01 Dec 2024
https://github.com/iskandr/nnseq
Multi-sequence learning using recurrent neural networks
Last synced: 01 Dec 2024
https://github.com/iskandr/simple-somatic-variant-calling
A simple genomics "pipeline" implemented via shell scripts
Last synced: 01 Dec 2024
https://github.com/iskandr/immunesearch
Search for peptide substrings in IEDB T-cell assay data
Last synced: 01 Dec 2024
https://github.com/iskandr/vec
Simple vector expression language implemented in Python
Last synced: 01 Dec 2024
https://github.com/iskandr/interval
Conversion between genomic interval/coordinate systems
Last synced: 01 Dec 2024
https://github.com/iskandr/msmhc
Looking for "dark matter" of the MHC ligandome in mass specta
Last synced: 01 Dec 2024
https://github.com/iskandr/bumpkin
Experiment in writing an OCaml web framework.
Last synced: 01 Dec 2024
https://github.com/iskandr/prototype-pan-allele-class2
Prototype of a pan-allele Class II MHC binding predictor
Last synced: 01 Dec 2024
https://github.com/iskandr/loopy_conv
GPU Convolution Kernels in Python using Loopy
Last synced: 01 Dec 2024
https://github.com/iskandr/mri_biopsy
Predict presence of prostate cancer from pre-biopsy MRI images
Last synced: 01 Dec 2024
https://github.com/iskandr/mr-python-variant-caller
Simple somatic variant caller in Python w/ Hadoop Streaming
Last synced: 01 Dec 2024
https://github.com/iskandr/insert-aligner
k-mer aligner to detect where a transposon was inserted in a longer sequence
Last synced: 01 Dec 2024
https://github.com/iskandr/cohort-seq2hla
Run the TRON seq2HLA script on a collection of related RNA samples
Last synced: 01 Dec 2024
https://github.com/iskandr/lettersfromkiev.com
Aron Zakon's 1941 Letters from Kiev
Last synced: 01 Dec 2024
https://github.com/iskandr/avroglob
Bundle together the contents of a directory into a single AVRO file
Last synced: 01 Dec 2024
https://github.com/iskandr/scalarmix
Vectorized implementation of scalar two component gaussian mixture models
Last synced: 01 Dec 2024
https://github.com/iskandr/vaxrank-application-note-2017
Draft of a Bioinformatics Application Note for Vaxrank
Last synced: 01 Dec 2024
https://github.com/iskandr/bioseq
Compact library for working with biological sequences (DNA, RNA, and Proteins)
Last synced: 01 Dec 2024
https://github.com/iskandr/ndtypes
Types for describing n-dimensional arrays and index expressions
Last synced: 01 Dec 2024
https://github.com/iskandr/sam-perf-experiments
Simple performance test of SAM parsing performance in Python
Last synced: 01 Dec 2024
https://github.com/iskandr/trialsearch
Learning solr, making a simple clinical trial search
Last synced: 01 Dec 2024
https://github.com/iskandr/bbn963-transcriptome
Analysis of BBN963 PacBio Iso-Seq
Last synced: 01 Dec 2024
https://github.com/iskandr/pepsearch
Search reference proteomes for short peptides
Last synced: 01 Dec 2024
https://github.com/iskandr/ensembl
Interface to ensembl's human genome annotations
Last synced: 01 Dec 2024
https://github.com/iskandr/mhc_ligandome
MHC binding predictions for human proteome
Last synced: 01 Dec 2024
https://github.com/iskandr/blitzy
A friendly layer atop Loopy for generating OpenCL kernels in Python
Last synced: 01 Dec 2024