Projects in Awesome Lists by jasenfinch
A curated list of projects in awesome lists by jasenfinch .
https://github.com/jasenfinch/metabolyser
Methods for pre-treatment, modelling/data mining, and correlation analyses of metabolomics data
correlation-analyses data-mining metabolomics-data modelling pre-treatment r-package
Last synced: 10 Feb 2025
https://github.com/jasenfinch/grover
Web API Framework for Mass Spectrometry Data Transfer
conversion mass-spectrometry metabolomics-data metadata plumber-api r-package transfer web-api
Last synced: 05 Apr 2025
https://github.com/jasenfinch/spectral_binning_as_an_approach_to_post-acquisition_processing_of_fie-hrms_data
Spectral binning as an approach to post-acquisition processing of high resolution FIE-HRMS metabolome fingerprinting data
manuscript mass-spectrometry metabolomic-fingerprinting metabolomics post-acquisition-processing reproducible-research
Last synced: 05 Apr 2025
https://github.com/jasenfinch/hrm
Easily install, load and update R packages for high-resolution metabolomics analyses
Last synced: 05 Apr 2025
https://github.com/jasenfinch/pretreatment
Data pre-treatment methods for metabolomics analyses
Last synced: 05 Apr 2025
https://github.com/jasenfinch/metabomisc
Miscellaneous helper and linker functions for metabolomics analyses
Last synced: 05 Apr 2025
https://github.com/jasenfinch/composition
Compositional analyses for metabolomics data
Last synced: 05 Apr 2025
https://github.com/jasenfinch/hrm-docker
Docker containers for high resolution metabolomics analyses in R
Last synced: 05 Apr 2025
https://github.com/jasenfinch/projecttemplates
R project templates for reproducible research and analyses
r reproducibility reproducible-research reproducible-science research-project research-tool
Last synced: 05 Apr 2025
https://github.com/jasenfinch/metaboworkflows
Workflow Project Templates for Metabolomics Analyses
metabolomics metabolomics-pipeline r r-package reproducible-research rstats
Last synced: 05 Apr 2025
https://github.com/jasenfinch/cheminf
Chemoinformatics tools for annotating untargeted ESI-MS metabolomics data
Last synced: 05 Apr 2025
https://github.com/jasenfinch/metaboreports
Automated report generation for high resolution metabolomics analyses
Last synced: 05 Apr 2025
https://github.com/jasenfinch/hrmtargets
Targets for high resolution metabolomics workflows
Last synced: 05 Apr 2025
https://github.com/jasenfinch/hrm-tests
workflow tests for high resolution metabolomics analyses
Last synced: 05 Apr 2025
https://github.com/jasenfinch/data_driven_matrix-wide_molecular_formula_assignment_for_high_resolution_esi-ms
Data driven, matrix-wide molecular formula assignment for high resolution ESI-MS
Last synced: 05 Apr 2025
https://github.com/jasenfinch/construction
Consensus structural classifications for putative molecular formula assignments
Last synced: 05 Apr 2025
https://github.com/jasenfinch/index_measures_for_oak_decline_severity_using_phenotypic_descriptors
Index measures for oak decline severity using phenotypic descriptors
machine-learning manuscript measures oak-decline-severity reproducible-research
Last synced: 05 Apr 2025
https://github.com/jasenfinch/jftargets
A collection of utility functions for use with targets pipelines
Last synced: 05 Apr 2025
https://github.com/jasenfinch/riches
Functional and structural enrichment for metabolomic analyses
functional-enrichment-analysis metabolomic-analyses
Last synced: 05 Apr 2025
https://github.com/jasenfinch/profilepro
Unified input and output for processing of metabolomic profiling experiments
Last synced: 05 Apr 2025
https://github.com/jasenfinch/pdi
Phenotypic index measures for oak decline severity
decline index oak phenotyping r
Last synced: 29 Mar 2025
https://github.com/jasenfinch/minder
Monitor your Linux system from within R
Last synced: 05 Apr 2025
https://github.com/jasenfinch/chunky
Programmatic R Markdown code chunk generation
Last synced: 05 Apr 2025
https://github.com/jasenfinch/remotetools
Interact with and execute R code on a remote host via ssh
Last synced: 05 Apr 2025