Ecosyste.ms: Awesome
An open API service indexing awesome lists of open source software.
Projects in Awesome Lists by jebyrnes
A curated list of projects in awesome lists by jebyrnes .
https://github.com/jebyrnes/ecological-sems-in-lavaan
Recreating SEM analyses from papers using the R lavaan package
Last synced: 14 Oct 2024
https://github.com/jebyrnes/semclass
Github repo for SEM for Ecology and Evolutionary Biology course
Last synced: 14 Oct 2024
https://github.com/jebyrnes/multifunc
A package for the analysis of how drivers affect multiple functions in a system.
Last synced: 14 Oct 2024
https://github.com/jebyrnes/spatial_correction_lavaan
A method to alter standard errors from spatial autocorrelation using lavaan and ape
Last synced: 14 Oct 2024
https://github.com/jebyrnes/ne_marsh_food_web
Data on feeding interactions in New England Salt Marshes from M. J. Hensel
Last synced: 14 Oct 2024
https://github.com/jebyrnes/phrag_common_garden_sem
Code repo for Plant lineage determines rhizosphere microbial structure and activity in a cosmopolitan species
Last synced: 14 Oct 2024
https://github.com/jebyrnes/divchangehmm
Development of hierarchical methods for examining change in species diversity
Last synced: 14 Oct 2024
https://github.com/jebyrnes/r_deep_learning_vision_systems
This is an attempt to translate Deep Learning for Vision Systems into R code using the keras and tensorflow library.
Last synced: 14 Oct 2024
https://github.com/jebyrnes/ovb_yeah_you_know_me
To keep track of the developing omitted variable bias MS
Last synced: 14 Oct 2024
https://github.com/jebyrnes/ff-import-pipeline
Import pipeline step by step for floating forests
Last synced: 14 Oct 2024
https://github.com/jebyrnes/keen_gom_temp
Repo for GOM Temperature-Kelp forest paper
Last synced: 14 Oct 2024
https://github.com/jebyrnes/seagrass-multifunc
Multifunc talk from WSN 2013
Last synced: 14 Oct 2024
https://github.com/jebyrnes/meowr
Data and methods to utilize Spalding et al.'s marine ecoregions of the world
Last synced: 14 Oct 2024
https://github.com/jebyrnes/sinterval
Generate simulated values from models with different intervals of uncertainty
Last synced: 14 Oct 2024
https://github.com/jebyrnes/quantreglines
A function to plot quantile regression lines
Last synced: 14 Oct 2024
https://github.com/jebyrnes/grant_applications
All grants I've ever submitted
Last synced: 14 Oct 2024
https://github.com/jebyrnes/ipbes_marine_americas
Code for making figures for IPBES report on marine diversity in the Americas
Last synced: 14 Oct 2024
https://github.com/jebyrnes/pieDivPlots
A function for plotting pie charts instead of points to simultaneously show diversity and composition effects in diversity-ecosystem function experiments.
Last synced: 05 Aug 2024
https://github.com/jebyrnes/velresponse
A re-analysis of the data from Vellend et al 2013. PNAS http://dx.doi.org/10.1073/pnas.1312779110
Last synced: 14 Oct 2024
https://github.com/jebyrnes/causal_mods
Exploration of causal model structures for http://rpubs.com/jebyrnes/causal_mods
Last synced: 14 Oct 2024
https://github.com/jebyrnes/piedivplots
A function for plotting pie charts instead of points to simultaneously show diversity and composition effects in diversity-ecosystem function experiments.
Last synced: 14 Oct 2024
https://github.com/jebyrnes/r-spatial_dc_workshop_2019-01-22
Code from Jan 22-23 2019 Geospatial Data Carpentry workshop at UMB https://jebyrnes.github.io/2019-01-22-UMB/
Last synced: 14 Oct 2024
https://github.com/jebyrnes/2020_uri_talk
2020 Talk for URI R Users Group
professional-development programming r
Last synced: 14 Oct 2024
https://github.com/jebyrnes/covid19_shiny
A shiny app for exploring the covid-19 data from Rami Krispin's coronavirus R package.
Last synced: 14 Oct 2024
https://github.com/jebyrnes/2020-07-08-umb-online
Website for 2020 DC Ecology Workshop at UMass Boston
Last synced: 14 Oct 2024
https://github.com/jebyrnes/floatingforests
Code for http://floatingforests.org analysis. Data is huge and changes weekly, so, for the moment, will not be posted. Ask if you'd like a copy.
Last synced: 14 Oct 2024
https://github.com/jebyrnes/unlocoder
The UN/LOCODE Code for Trade and Transport Locations
Last synced: 14 Oct 2024
https://github.com/jebyrnes/test_repo_stringr
This is a test repo to show Thew how to setup a repo
Last synced: 14 Oct 2024
https://github.com/jebyrnes/fish_kelp_meta
Code and Data for Pérez-Matus, A., Micheli, F., Konar, B., Shears, N., Low, N., Okamoto, D., Wernberg, T., Krumhansl, K., Ling, S., Kinsgford, M., Navarrete-Fernandez, T., Ruz, C., and Byrnes, J. 2024. Kelp forests as nursery and foundational habitat for reef fish. Ecology.
Last synced: 14 Oct 2024
https://github.com/jebyrnes/wikiiso31662
Provides ISO 3166-2 Subdivision and Country Codes According to Wikipedia
Last synced: 14 Oct 2024
https://github.com/jebyrnes/community_indices
calculate simple diversity indices from SML data
Last synced: 14 Oct 2024
https://github.com/jebyrnes/appledore_temp_depth
Depth and temperature profiles around Appledore Island
Last synced: 14 Oct 2024
https://github.com/jebyrnes/intecol-multifunc
Slidify code and images from 2013 INTECOL talk on BEMF paper
Last synced: 14 Oct 2024
https://github.com/jebyrnes/imachordata
ye olde blog - ported from 2008 - 2016 version. Here's to hoping I can one day recover the 2002-2008 entries!
Last synced: 14 Oct 2024
https://github.com/jebyrnes/extinction-meta
Meta-analysis of extinction selectivity in ancient and modern seas
Last synced: 14 Oct 2024
https://github.com/jebyrnes/coca_2017
Repository for generating habitat suitability maps for NOAA COCA project in 2018 looking at green v. grey infrastructure
Last synced: 14 Oct 2024
https://github.com/jebyrnes/keen_one_foodwebs
KEEN site level food web analysis for RARGOM
Last synced: 14 Oct 2024
https://github.com/jebyrnes/links_to_important_sources
A repo for links to important sources of data, literature, etc.
Last synced: 14 Oct 2024
https://github.com/jebyrnes/murep_dropcam
A webapp to look at the MUREP dropcam footage
Last synced: 14 Oct 2024
https://github.com/jebyrnes/otu-frontiers
Code for the analysis of sequence and OTU occurance data to derive optimal taxonomic structures for bacterial communities.
Last synced: 14 Oct 2024