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Common Workflow Language
CWL documents describe workflows made of command line data analysis tools in a portable, reproducible, and reusable fashion.
- GitHub: https://github.com/topics/cwl
- Wikipedia: https://en.wikipedia.org/wiki/Common_Workflow_Language
- Repo: https://github.com/common-workflow-language
- Created by: Peter Amstutz, John Chilton, Michael R. Crusoe, Nebojša Tijanić, and the CWL Community
- Released: January 2015
- Aliases: common-workflow-language, commonwl,
- Last updated: 2024-07-29 13:36:21 UTC
- JSON Representation
https://github.com/common-workflow-language/common-workflow-language
Repository for the CWL standards. Use https://cwl.discourse.group/ for support 😊
common-workflow-language commonwl containers cwl science sciworkflows workflow workflows
Last synced: 02 Aug 2024
https://github.com/DataBiosphere/toil
A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.
aws common-workflow-language cwl gridengine kubernetes mesos pipeline python slurm wdl workflow workflow-description-language
Last synced: 01 Aug 2024
https://github.com/Barski-lab/cwl-airflow
Python package to extend Airflow functionality with CWL1.1 support
common-workflow-language commonwl containers cwl cwl-airflow cwl-descriptor dag workflow
Last synced: 06 Aug 2024
https://github.com/CBICA/CaPTk
Cancer Imaging Phenomics Toolkit (CaPTk) is a software platform to perform image analysis and predictive modeling tasks. Documentation: https://cbica.github.io/CaPTk
analytics cancer cancer-imaging-research cbica cpp cpp11 cwl cwltool image-analysis itcr machine-learning medical-image-computing medical-image-processing medical-imaging nci nci-itcr nih radiomics radiomics-features u24
Last synced: 03 Aug 2024
https://github.com/4dn-dcic/tibanna
Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data. Tibanna supports CWL/WDL (w/ docker), Snakemake (w/ conda) and custom Docker/shell command.
aws aws-lambda aws-step-function bioinformatics conda cwl cwl-workflow docker pipelines snakemake snakemake-workflow wdl wdl-workflow
Last synced: 01 Aug 2024