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https://github.com/interactivereport/cellxgene_VIP

Enables cellxgene to generate violin, stacked violin, stacked bar, heatmap, volcano, embedding, dot, track, density, 2D density, sankey and dual-gene plot in high-resolution SVG/PNG format. It also performs differential gene expression analysis and provides a Command Line Interface (CLI) for advanced users to perform analysis using python and R.

cellxgene cellxgene-vip publication-quality-plots scanpy scrna-seq seurat svg visualization

Last synced: 16 Jun 2024