Projects in Awesome Lists tagged with scalebar
A curated list of projects in awesome lists tagged with scalebar .
https://github.com/lukmuk/em-scalebartools
Fiji/ImageJ macros to quickly add a scale bar to an (electron microscopy) image.
electron-microscopy fiji imagej scalebar
Last synced: 07 May 2025
https://github.com/indus/dv-scalebar
a scalebar web-component for vertical and horizontal usage that scales responsive and allows styling via CSS variables.
lit lit-element scalebar vue vue3 vuejs web-component
Last synced: 14 Dec 2024
https://github.com/lauraluebbert/confocal_z-stack_analysis
Imaging experiments in Biology often involve the acquisition of confocal z-stack images to quantify fluorescent signal in a biological sample. These z-stacks are usually analyzed using open-source programs such as FIJI, which are notoriously frustrating to work with, and do not facility intuitive high-throughput analysis of many images at once. Manual image analysis is labor-intensive, time-consuming, and prone to human error. I compiled two notebooks to streamline two of the most commonly performed tasks in the analysis of confocal z-stack images: the generation of "pretty" maximum projections, and the analysis of pixel values/ fluorescence from sum projections.
confocal-images confocal-microscopy confocal-zstack-images despeckle image-processing maximum-projection scalebar scikit-image
Last synced: 06 Dec 2024
