Projects in Awesome Lists tagged with stochastic-simulation
A curated list of projects in awesome lists tagged with stochastic-simulation .
https://github.com/danieljsharpe/DISCOTRESS
🦜 DISCOTRESS 🦜 is a software package to simulate and analyse the dynamics on arbitrary Markov chains
continuous-time-markov-chain ctmc dtmc enhanced-sampling k-shortest-paths kinetic-monte-carlo markov-chain markov-chains markov-model markov-process markovian-dynamics network-dynamics random-walk rare-events simulation simulation-algorithms stochastic-processes stochastic-simulation stochastic-simulation-algorithm
Last synced: 26 Mar 2025
https://github.com/clauswilke/pinetree
🌲 a flexible gene expression simulator with codon-specific translation rates
codons gene-expression gillespie-algorithm stochastic-simulation transcription translation
Last synced: 22 Mar 2025
https://github.com/danieljsharpe/DISCOTRESS_tutorials
Learn to get started using DISCOTRESS with these tutorials! Then apply to your own Markov chains in ecology 🦜🌴 economics 💸📈 biophysics 🧬🦠 and more!
ctmc discrete-event-simulation dtmc kinetic-monte-carlo markov-chain markov-decision-process markov-decision-processes markov-model markov-process markovian-dynamics network-dynamics random-walk rare-events simulation stochastic-dynamics stochastic-simulation stochastic-simulation-algorithm tutorials
Last synced: 26 Mar 2025
https://github.com/jmiszczak/gol_rule_switching
Implementation of the Game of Life with rule switching
agent-based-modeling artificial-life cellular-automata stochastic-simulation
Last synced: 10 Mar 2025
https://github.com/zncl2222/uc_sgsim
An uncondition random field generation tools that are easy to use
c geostatistics python simulation stochastic-simulation
Last synced: 17 Feb 2025
https://github.com/wondermongering/stochasticgutbrainmodel
StochasticGutBrainModel is a computational simulation framework that explores the complex interactions between the gut microbiome, metabolites, hormones, and neural signaling in the gut-brain axis
bioinformatics computational-biology computational-neuroscience differential-equations educational gut-brain-axis gut-microbiota hobby-project interdisciplinary mathematical-modelling matplot metabolism numpy open-source pandas py scipy stochastic-simulation
Last synced: 03 Mar 2025
https://github.com/bashpoet/stochasticgutbrainmodel
StochasticGutBrainModel is a computational simulation framework that explores the complex interactions between the gut microbiome, metabolites, hormones, and neural signaling in the gut-brain axis
bioinformatics computational-biology computational-neuroscience differential-equations educational gut-brain-axis gut-microbiota hobby-project interdisciplinary mathematical-modelling matplot metabolism numpy open-source pandas py scipy stochastic-simulation
Last synced: 28 Feb 2025
https://github.com/lgautier/rhinoceros
Illustrate and experiment with code and data an epidemic and the need for social distancing
covid-19 epidemic jupyter-notebook simulation stochastic-simulation
Last synced: 24 Feb 2025
https://github.com/kivanc57/rquests
The RQuest project uses R to analyze textual data, focusing on tasks like calculating word lengths, comparing languages, and extracting linguistic features with udpipe. It includes statistical methods, visualizations, and stochastic simulations, showcasing diverse approaches to text modeling.
data-science entropy language-comparison linguistic-analysis r statistical-testing stochastic-simulation t-test
Last synced: 10 Mar 2025
