Projects in Awesome Lists by AndreaGuarracino
A curated list of projects in awesome lists by AndreaGuarracino .
https://github.com/andreaguarracino/paf2chain
convert PAF format to CHAIN format
Last synced: 10 Apr 2025
https://github.com/andreaguarracino/chain2paf
convert CHAIN format to PAF format
Last synced: 10 Apr 2025
https://github.com/andreaguarracino/1000g-ont-f100-pggb
PanGenome Graph Building with the first 100 assemblies from the 1000G ONT Sequencing Consortium
Last synced: 10 Apr 2025
https://github.com/andreaguarracino/datastructuresforbioinformatics
Data Structures for Bioinformatics - LM Bioinformatics - University of Rome Tor Vergata
Last synced: 10 Apr 2025
https://github.com/andreaguarracino/wfpoa
An extension to the wavefront algorithm that generalizes it to work on directed acyclic sequence graphs
alignment consensus-sequences msa multiple-sequence-alignment partial-order-alignment wavefront wfa
Last synced: 24 Nov 2024
https://github.com/andreaguarracino/rs-spodgi
Line-by-line converter from GFA to RDF (turtle)
bioinformatics gfa variationgraphs
Last synced: 18 Mar 2025
https://github.com/andreaguarracino/referencegraphpangenomedataanalysishackathon2023
Material for the Reference Graph Pangenome Data Analysis Hackathon 2023, November 13-17 in Cape Town, South Africa
Last synced: 18 Mar 2025
https://github.com/andreaguarracino/hg002_assemblies_assessment
Pangenomic assessment of HG002 assemblies
Last synced: 18 Mar 2025
https://github.com/andreaguarracino/mempig
MEM Pangenome Injection Genotyping
Last synced: 23 Apr 2025
https://github.com/andreaguarracino/lib_wfa2
Rust bindings for the WFA2-lib
Last synced: 02 Mar 2025
https://github.com/andreaguarracino/lib_tracepoints
Compressed alignment representation
Last synced: 02 Mar 2025
https://github.com/andreaguarracino/andreaguarracino.github.io
Curriculum Vitae
Last synced: 18 Mar 2025