Projects in Awesome Lists by HenriquesLab
A curated list of projects in awesome lists by HenriquesLab .
https://github.com/HenriquesLab/ZeroCostDL4Mic
ZeroCostDL4Mic: A Google Colab based no-cost toolbox to explore Deep-Learning in Microscopy
Last synced: 07 May 2025
https://github.com/henriqueslab/nanopyx
Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging
Last synced: 15 Sep 2025
https://github.com/henriqueslab/nanoj-fluidics
Manual, source-code and binaries for the NanoJ-Fluidics project
automation dna-paint electronics fluidics high-content lego live-cell microscopy pump storm super-resolution
Last synced: 15 Sep 2025
https://github.com/henriqueslab/nanoj-srrf
Super-resolution radial fluctuations (SRRF)
Last synced: 15 Sep 2025
https://github.com/henriqueslab/rxiv-maker
Rxiv-Maker is a GitHub-native framework that converts markdown into a publication-ready PDF. It automates scientific preprint generation with a focus on reproducibility and version control
article-template preprint preprints publishing
Last synced: 05 Feb 2026
https://github.com/henriqueslab/photofitt
Computational workflows to assess phototoxicity in live-cell microscopy experiments
Last synced: 22 Oct 2025
https://github.com/henriqueslab/sred
Structural Repetition Detector (SReD) - Quantitative mapping of molecular complexes
Last synced: 15 Sep 2025
https://github.com/henriqueslab/ezinput
EZInput is a Python library that simplifies the creation of graphical user interfaces (GUIs) both in the terminal and in Jupyter notebooks. It provides a convenient way to add various types of widgets, making it easier to interact with your code and visualize results.
Last synced: 15 Sep 2025
https://github.com/henriqueslab/rescale4dl
ReScale4DL: Balancing Pixel and Contextual Information for Enhanced Bioimage Segmentation
Last synced: 15 Sep 2025
https://github.com/henriqueslab/fieldguide_3dprinting_microscopy
A repository of 3D models referenced in "The field guide to 3D printing in microscopy"
Last synced: 15 Sep 2025
https://github.com/henriqueslab/scmos_characterisation_macros
The mactos I wrote to characterise an sCMOS camera px noise statistics
Last synced: 15 Sep 2025
https://github.com/henriqueslab/dl4miceverywhere-bioimage-io
DL4MicEveryqhere Bioimage.IO Resources
Last synced: 15 Sep 2025
https://github.com/henriqueslab/docker-rxiv-maker
Docker image building infrastructure for rxiv-maker with weekly and on-demand builds
Last synced: 15 Sep 2025
https://github.com/henriqueslab/fusiontools
Scripts used for "Nanoscale Polarization of the Vaccinia Virus Entry Fusion Complex Drives Efficient Fusion" publication
Last synced: 15 Sep 2025
https://github.com/henriqueslab/henriqueslab-biorxiv-template
Please go to https://www.overleaf.com/latex/templates/henriqueslab-biorxiv-template/nyprsybwffws for the original template. This repo will disappear in few days
Last synced: 12 Feb 2026