Projects in Awesome Lists by KrasnitzLab
A curated list of projects in awesome lists by KrasnitzLab .
https://github.com/krasnitzlab/scgv
SCGV is an interactive graphical tool for single-cell genomics data, with emphasis on single-cell genomics of cancer
genomics genomics-visualization single-cell single-cell-genomics
Last synced: 12 Apr 2025
https://github.com/krasnitzlab/raids
Accurate and robust inference of genetic ancestry from cancer-derived molecular data across genomic platforms
ancestry cancer-genomics exome-sequencing genomics inference r-language r-package rna-seq rna-sequencing whole-genome-sequencing
Last synced: 12 Apr 2025
https://github.com/krasnitzlab/cnvmetrics
R Package to compare copy number variant (CNV) results from multiple samples/methods
cnv copy-number-variation metrics package r r-language r-package
Last synced: 18 Mar 2025
https://github.com/krasnitzlab/cnprep
CNprep Package - Pre-process DNA Copy Number (CN) Data for Detection of CN Events
bootstrap copy-number copy-number-variation dna-copy-number r r-package
Last synced: 12 Apr 2025
https://github.com/krasnitzlab/sgains
Sparse Genomic Analysis of Individual Nuclei by Sequencing
Last synced: 26 Mar 2025
https://github.com/krasnitzlab/organoidstoolbox
Enabling organoid analyses using drug sreening, RNA-seq, exome-seq
Last synced: 26 Mar 2025
https://github.com/krasnitzlab/scclust
Segmentation and Clustering of Single Cell Sequencing Copy Number Profiles
clustering r segmentation single-cell-genomics
Last synced: 26 Mar 2025