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Projects in Awesome Lists by SilasK

A curated list of projects in awesome lists by SilasK .

https://github.com/silask/ipath3

Python wrapper for ipath3

ipath kegg metabolites pandas-dataframe python3 wrapper

Last synced: 12 Oct 2024

https://github.com/silask/16s-dada2

Snakemake pipeline for amplicon sequencing using dada2

Last synced: 12 Oct 2024

https://github.com/silask/statsplot

Last synced: 12 Oct 2024

https://github.com/silask/krak

Snakemake for flexitaxd and Kraken2

Last synced: 12 Oct 2024

https://github.com/silask/fastdrep

Last synced: 21 Nov 2024

https://github.com/silask/bubbleplot

Last synced: 21 Nov 2024

https://github.com/silask/metagenome-qc

Snakmake-workflow for qc

Last synced: 21 Nov 2024

https://github.com/silask/warmmicrobiota

Code and supplementary data

Last synced: 21 Nov 2024

https://github.com/silask/cmmg_tools

Code for analysis of CMMG

Last synced: 21 Nov 2024

https://github.com/silask/cdm_pipeline

Last synced: 21 Nov 2024

https://github.com/silask/readthedocs

Last synced: 21 Nov 2024

https://github.com/silask/sra_download

Last synced: 21 Nov 2024

https://github.com/silask/microbiome-analysis

CODA microbiome-analysis using aldex2, pylofactorisation

Last synced: 21 Nov 2024

https://github.com/silask/rna-seq

Last synced: 21 Nov 2024

https://github.com/silask/oldsra_download

script for downloading files from sra

Last synced: 21 Nov 2024

https://github.com/silask/abinner

Last synced: 21 Nov 2024

https://github.com/silask/snake_plass

Last synced: 06 Nov 2024

https://github.com/silask/profiler

Fast profiler using mmseqs

Last synced: 21 Nov 2024

https://github.com/silask/snakebread

Last synced: 21 Nov 2024

https://github.com/silask/funmetagenomics

Genome-resolved functional metagenomics for human and mice

Last synced: 21 Nov 2024