Ecosyste.ms: Awesome
An open API service indexing awesome lists of open source software.
Projects in Awesome Lists by bdpedigo
A curated list of projects in awesome lists by bdpedigo .
https://github.com/bdpedigo/networks-course
A short course on network data science at Johns Hopkins University
data-science jupyter-book network-analysis networks python python3 teaching teaching-materials
Last synced: 10 Nov 2024
https://github.com/bdpedigo/neuropull
A (soon to be) lightweight Python package for accessing single-cell connectome networks with metadata.
connectome connectomes connectomics data dataset networks networks-biology
Last synced: 10 Nov 2024
https://github.com/bdpedigo/sparse_decomposition
Implementations from "A New Basis for Sparse PCA" paper at https://arxiv.org/abs/2007.00596
decomposition pca sparse-coding sparse-matrix sparse-representations
Last synced: 10 Nov 2024
https://github.com/bdpedigo/giskard
A random collection of tools I find useful for data science.
Last synced: 10 Nov 2024
https://github.com/bdpedigo/networkframe
Lightweight representations of networks using Pandas DataFrames
network-analysis networks pandas
Last synced: 10 Nov 2024
https://github.com/bdpedigo/paleo
Python package for interfacing with CAVE edit histories
Last synced: 10 Nov 2024
https://github.com/bdpedigo/oss
Resources for the open-source software development course
Last synced: 10 Nov 2024
https://github.com/bdpedigo/sandobot
Twitter scraping for Seattle Sandwich Reviews
Last synced: 10 Nov 2024
https://github.com/bdpedigo/skedits-app
Tools for orchestrating skeleton analysis in cloud infrastructure
Last synced: 10 Nov 2024
https://github.com/bdpedigo/py-graph-lib
Collection of python graph libraries and tools that could be useful
Last synced: 10 Nov 2024
https://github.com/bdpedigo/cloud-workflow-mwe
Minimal working example for cloud workflow using CAVE, Amazon SQS, Google Cloud Storage, etc.
Last synced: 10 Nov 2024
https://github.com/bdpedigo/lamination-evaluation
Analyzing the results of the 2024 "Best Croissant in Seattle" tournament from the Allen Institute Electron Microscopy Connectomics team
Last synced: 10 Nov 2024
https://github.com/bdpedigo/sparse_new_basis
Experiments related to "A New Basis for Sparse PCA"
Last synced: 10 Nov 2024
https://github.com/bdpedigo/cave-ecosystem
Mapping packages and services in the CAVE ecosystem
Last synced: 10 Nov 2024
https://github.com/bdpedigo/mesh-processing
Short scripts and functions for reading in binary meshes, downsampling if necessary, and exporting as .stl
Last synced: 10 Nov 2024
https://github.com/bdpedigo/resources
Collection of helpful links and commands
Last synced: 10 Nov 2024
https://github.com/bdpedigo/em-diagnostics
Tools for analyzing the quality of EM image alignments
Last synced: 10 Nov 2024
https://github.com/bdpedigo/neuroblend
Python module for interfacing with neuron meshes and graph data
Last synced: 10 Nov 2024
https://github.com/bdpedigo/neuroglancer-wintermute
Very short module importing neuroglancer urls into python, and making neuroglancer urls from python
Last synced: 10 Nov 2024
https://github.com/bdpedigo/graph-libs
Stashing graph libraries I come across (mostly just Python ones)
Last synced: 10 Nov 2024
https://github.com/bdpedigo/skedits
Examining the effect of proofreading on inferences in connectomics
connectomics network network-analysis networks
Last synced: 10 Nov 2024
https://github.com/bdpedigo/synapse-analysis
IPython notebook demoing some of analysis on synapses from Princeton graph
Last synced: 10 Nov 2024
https://github.com/bdpedigo/skervice
Skeletonization service for the CAVE ecosystem
Last synced: 10 Nov 2024
https://github.com/bdpedigo/morphlink
Framework for linking representations and features of morphology
Last synced: 10 Nov 2024