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Projects in Awesome Lists by imagej

A curated list of projects in awesome lists by imagej .

https://github.com/imagej/imagej2

Open scientific N-dimensional image processing :microscope: :sparkler:

computer-vision image-processing

Last synced: 14 May 2025

https://github.com/imagej/imagej

Public domain software for processing and analyzing scientific images

computer-vision image-processing

Last synced: 14 May 2025

https://github.com/imagej/ImageJ

Public domain software for processing and analyzing scientific images

computer-vision image-processing

Last synced: 07 May 2025

https://github.com/imagej/pyimagej

Use ImageJ from Python

Last synced: 16 May 2025

https://github.com/imagej/tutorials

ImageJ2 programming examples

binder-ready

Last synced: 06 Apr 2025

https://github.com/imagej/imagej-ops

ImageJ Ops: "Write once, run anywhere" image processing

Last synced: 18 Jul 2025

https://github.com/imagej/imagej-server

A RESTful web server for ImageJ [EXPERIMENTAL]

Last synced: 30 Apr 2025

https://github.com/imagej/example-legacy-plugin

Simple Maven project for an ImageJ 1.x plugin

Last synced: 29 Jul 2025

https://github.com/imagej/example-imagej2-command

Simple Maven project for an ImageJ2 command

Last synced: 30 Apr 2025

https://github.com/imagej/napari-imagej

Use ImageJ functionality from napari

fiji imagej java napari python

Last synced: 01 Aug 2025

https://github.com/imagej/imagej-scripting

ImageJ-specific applications of the SciJava script languages

Last synced: 09 Mar 2026

https://github.com/imagej/imagej.github.io

The ImageJ wiki

Last synced: 13 Apr 2025

https://github.com/imagej/imagej-tensorflow

ImageJ/TensorFlow integration library

Last synced: 19 Oct 2025

https://github.com/imagej/imagej-launcher

The ImageJ native launcher

Last synced: 14 Jul 2025

https://github.com/imagej/ops-experiments

EXPERIMENTAL repository for exploring Ops approaches, algorithms, etc.

Last synced: 30 Apr 2025

https://github.com/imagej/imagej-legacy

ImageJ+ImageJ2 compatibility layer

Last synced: 24 Oct 2025

https://github.com/imagej/imagej-matlab

MATLAB integration with ImageJ data structures and runtime.

Last synced: 30 Apr 2025

https://github.com/imagej/imagej-updater

The automatic updater for ImageJ

Last synced: 16 Apr 2025

https://github.com/imagej/imagej-omero

Server- and client-side communication between ImageJ and OMERO

Last synced: 30 Apr 2025

https://github.com/imagej/imagej-ui-swing

ImageJ UI for Java Swing.

Last synced: 30 Apr 2025

https://github.com/imagej/imagej-common

ImageJ core data model

Last synced: 30 Apr 2025

https://github.com/imagej/example-script-collection

Example project demonstrating how to package ImageJ scripts into a single jar file

Last synced: 19 Oct 2025

https://github.com/imagej/imagej-electron-app

[EXPERIMENTAL] Electron app embedding ImageJ + JS image visualization tools

Last synced: 30 Apr 2025

https://github.com/imagej/imagej-node

ImageJ module for node.js

Last synced: 30 Apr 2025

https://github.com/imagej/imagej-itk

ITK integration for ImageJ

Last synced: 30 Apr 2025

https://github.com/imagej/list-of-update-sites

The update sites ImageJ2 knows about automatically

Last synced: 05 Apr 2025

https://github.com/imagej/imagej-mesh

Data structures and I/O for meshes

Last synced: 30 Apr 2025

https://github.com/imagej/ij1-patcher

Extension points for ImageJ via runtime patching to support (limited) headless operation and ImageJ2's legacy layer

Last synced: 30 Apr 2025

https://github.com/imagej/example-imagej2-command-kotlin

An ImageJ command that mixes Kotlin and Java code

Last synced: 30 Jun 2025

https://github.com/imagej/presentations

ImageJ presentations

Last synced: 30 Apr 2025

https://github.com/imagej/imagej-troubleshooting

Interactive toy repository to demonstrate troubleshooting techniques.

Last synced: 30 Apr 2025

https://github.com/imagej/imagej-plugins-batch

Batch Processor Plugins for ImageJ

Last synced: 23 Jan 2026

https://github.com/imagej/workshops

ImageJ Workshops

Last synced: 01 Mar 2026

https://github.com/imagej/imagej-notebook

Routines for working with ImageJ from scientific notebook software (e.g. Jupyter)

Last synced: 30 Aug 2025

https://github.com/imagej/imagej-plugins-commands

Core ImageJ commands

Last synced: 27 Jul 2025

https://github.com/imagej/imagejdocu

Migration repository for imagejdocu.list.lu

Last synced: 28 Feb 2026

https://github.com/imagej/imagej-plugins-search-biii

ImageJ Search Plugin for BIII.eu

Last synced: 21 Jun 2025

https://github.com/imagej/imagej-updater-tests

Docker-based test infrastructure for ImageJ Updater

docker imagej sandbox tests updater

Last synced: 18 Aug 2025

https://github.com/imagej/example-android-app

[EXPERIMENTAL] An example using ImageJ in an Android project

Last synced: 18 Jun 2026

https://github.com/imagej/imagej-opencv

Convert between OpenCV and ImgLib2 data structures

Last synced: 30 Apr 2025

https://github.com/imagej/imagej-mesh-io

I/O plugins for ImageJ meshes and related data structures

Last synced: 25 May 2026

https://github.com/imagej/imagej-command-archetype

Maven archetype for a SciJava/ImageJ2 Command

imagej maven-archetype scijava

Last synced: 08 Oct 2025

https://github.com/imagej/imagej-plugins-tools

Core ImageJ tool plugins

Last synced: 21 Jan 2026

https://github.com/imagej/dotfiles

Configuration files for ImageJ resources

Last synced: 10 Feb 2026

https://github.com/imagej/mbf

Mirror of the MBF ImageJ manual

Last synced: 19 Mar 2026

https://github.com/imagej/pyimagej-dextr

Where I'm working on integrating pytorch and imagej (via pyimagej). This repo is experimental.

Last synced: 12 Jun 2026

https://github.com/imagej/example-bio-formats-legacy-plugin

Simple example of calling Bio-Formats with ImageJ 1.x + Java 6

Last synced: 18 Jun 2026

https://github.com/imagej/imagej-onnx

Last synced: 20 Jun 2026

https://github.com/imagej/imagej-ui-awt

ImageJ UI for Java AWT.

Last synced: 21 Jun 2025

https://github.com/imagej/pipermail

Retired ImageJ2 mailing list archives

Last synced: 19 Mar 2026

https://github.com/imagej/op-finder

Utility for browsing, learning about and running all available Ops

Last synced: 13 Feb 2026

https://github.com/imagej/imagej-plugins-uploader-ssh

Core ImageJ uploader plugin: SSH

Last synced: 18 Jun 2026

https://github.com/imagej/.github

ImageJ organization profile

Last synced: 19 Mar 2026

https://github.com/imagej/conference

ImageJ conference materials

Last synced: 19 Mar 2026

https://github.com/imagej/search

ImageJ search portal

Last synced: 11 Nov 2025

https://github.com/imagej/tickets

Archived static HTML version of legacy ImageJ Trac tickets

Last synced: 19 Mar 2026

https://github.com/imagej/imagej-omero-legacy

ImageJ 1.x support for ImageJ-OMERO

Last synced: 20 Jun 2026

https://github.com/imagej/imagej-deprecated

Deprecated ImageJ packages

Last synced: 17 Jun 2026

https://github.com/imagej/imagej-benchmarks

JMH-based benchmarks for projects of https://github.com/imagej/.

benchmark imagej jmh

Last synced: 12 Jun 2026

https://github.com/imagej/imagej-plugins-uploader-webdav

Core ImageJ uploader plugin: WebDAV

Last synced: 30 Apr 2025

https://github.com/imagej/imagej-ops2

Placeholder repository for incubating imagej-ops2 project

Last synced: 01 Mar 2026