Ecosyste.ms: Awesome
An open API service indexing awesome lists of open source software.
Projects in Awesome Lists by isaacovercast
A curated list of projects in awesome lists by isaacovercast .
https://github.com/isaacovercast/easysfs
Effective selection of population size projection for construction of the site frequency spectrum. Convert VCF to dadi/fastsimcoal style SFS for demographic analysis
Last synced: 29 Dec 2024
https://github.com/isaacovercast/quotewall
Interesting, surprising or hilarious sentences from here and there.
Last synced: 01 Dec 2024
https://github.com/isaacovercast/tc_goodquotes
Just some hilarious stuff people said...
Last synced: 01 Dec 2024
https://github.com/isaacovercast/fsc2_scripts
Shell scripts for automating replicate runs of fastsimcoal2
Last synced: 14 Oct 2024
https://github.com/isaacovercast/pied
A model of coevolving community abundance and phylogenetic birth/death processes.
Last synced: 19 Dec 2024
https://github.com/isaacovercast/babysims
Run just enough simulations to show basic trends in your data
Last synced: 01 Dec 2024
https://github.com/isaacovercast/pta-galapagosgeckos
Jupyter notebooks for PTA analysis of co-distributed Galapagos Geckos RADSeq data.
Last synced: 01 Dec 2024
https://github.com/isaacovercast/isaacovercast.github.io
My personal website:
Last synced: 01 Dec 2024
https://github.com/isaacovercast/argon_models
A simple python API to build ARGON models with arbitrary population sizes and migration histories.
Last synced: 01 Dec 2024
https://github.com/isaacovercast/wcs
Repo for code and fsc2 input files and observed SFS for Lipshutz et al 2016
Last synced: 01 Dec 2024
https://github.com/isaacovercast/gimmek
Highly optimized software for estimation of ancestry coefficients from genomic sequence data
Last synced: 01 Dec 2024
https://github.com/isaacovercast/gimmesad
Joint modelling of abundance and genetic diversity. An integrated model of population genetics and community ecology.
abundance approximate-bayesian-computation community-ecology community-genetic-diversity population-genetics species-abundance-distributions
Last synced: 19 Dec 2024
https://github.com/isaacovercast/sosfs
Singletons Only SFS: A highly optimized SFS representation for demographic inference
Last synced: 01 Dec 2024