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Projects in Awesome Lists by kdm9

A curated list of projects in awesome lists by kdm9 .

https://github.com/kdm9/scikit-biosim

Biological simulation in python

Last synced: 05 Nov 2024

https://github.com/kdm9/teaching-virtual-machine

Ansible code to spin up a VM for teaching bioinformatics

Last synced: 05 Nov 2024

https://github.com/kdm9/hons-thesis

Honours thesis for Kevin Murray's 2013 honours project.

Last synced: 05 Nov 2024

https://github.com/kdm9/raugraf

Last synced: 05 Nov 2024

https://github.com/kdm9/parephase

5'PARE phasing

Last synced: 05 Nov 2024

https://github.com/kdm9/jared_climate

Last synced: 05 Nov 2024

https://github.com/kdm9/panpipe

Last synced: 05 Nov 2024

https://github.com/kdm9/bfx-containers

Last synced: 05 Nov 2024

https://github.com/kdm9/pale-ale

My homebrew tap. Mostly bioinformatics

Last synced: 05 Nov 2024

https://github.com/kdm9/ouroborusco

Iterative extraction of busco loci from short read datasets for phylo purposes

Last synced: 05 Nov 2024

https://github.com/kdm9/staticbuilder

A docker image equipt to build static binaries

Last synced: 05 Nov 2024

https://github.com/kdm9/ardulapse

Last synced: 05 Nov 2024

https://github.com/kdm9/snakemake-wrappers

My snakemake wrappers

Last synced: 05 Nov 2024

https://github.com/kdm9/rnaseqpipeline

Last synced: 05 Nov 2024

https://github.com/kdm9/multiparthandler

Updated version of MultipartPostHandler

Last synced: 05 Nov 2024

https://github.com/kdm9/libqes

A small C library, with a bioinformatic focus. Optimised for speed and a clean API

Last synced: 05 Nov 2024

https://github.com/kdm9/kmin

A minimal hugo theme. Clean, simple, minimalist.

Last synced: 05 Nov 2024

https://github.com/kdm9/trears

Last synced: 05 Nov 2024

https://github.com/kdm9/blogv2

Last synced: 05 Nov 2024

https://github.com/kdm9/2017_cichilid-kwip-mash

Malinsky et al.

Last synced: 05 Nov 2024

https://github.com/kdm9/2016_1001-genomes

Analysis of 1kgenomes

Last synced: 05 Nov 2024

https://github.com/kdm9/dax-coral

Coral lighting for Dax

Last synced: 05 Nov 2024

https://github.com/kdm9/2015_kwip-samplesum

Debugging the samplesum mismatches

Last synced: 05 Nov 2024

https://github.com/kdm9/analyses

IPython notebooks for various projects

Last synced: 05 Nov 2024

https://github.com/kdm9/kdm9.r

Last synced: 05 Nov 2024

https://github.com/kdm9/chlasm

Last synced: 05 Nov 2024

https://github.com/kdm9/radhax

Scripts for analysis of reduced-representation sequencing (GBS, RADseq)

Last synced: 05 Nov 2024

https://github.com/kdm9/angstrom

Low coverage WGS data analysis package

Last synced: 05 Nov 2024

https://github.com/kdm9/pymusicorganiser

pymo organises your music based on media tags

Last synced: 05 Nov 2024

https://github.com/kdm9/windowlickr

Windowed vcf analyses in R

Last synced: 05 Nov 2024

https://github.com/kdm9/docker-kdmbio

My docker files for bioinformatics

Last synced: 05 Nov 2024

https://github.com/kdm9/fastdbarcode

DEPRECATED: Use AXE, at

Last synced: 05 Nov 2024

https://github.com/kdm9/phd-presentations

PhD-related Presenations

Last synced: 05 Nov 2024

https://github.com/kdm9/kdm801-vim

extra vim customisation

Last synced: 05 Nov 2024

https://github.com/kdm9/cmake

CMake modules i've written or modified

Last synced: 05 Nov 2024