Projects in Awesome Lists by kdm9
A curated list of projects in awesome lists by kdm9 .
https://github.com/kdm9/ouroborusco
Iterative extraction of busco loci from short read datasets for phylo purposes
Last synced: 09 Apr 2025
https://github.com/kdm9/hons-finalpresentation
Final presentation of my 2013 Honours project
Last synced: 09 Apr 2025
https://github.com/kdm9/sampler
Take photos of seeds/leavs in bags, automatically scanning in QR codes
Last synced: 09 Apr 2025
https://github.com/kdm9/chunksub
Submit chunked jobs to qsub-based clusters
Last synced: 09 Apr 2025
https://github.com/kdm9/kmin
A minimal hugo theme. Clean, simple, minimalist.
Last synced: 09 Apr 2025
https://github.com/kdm9/xspin
hacks around knitr::spin() for shell and python scripts
Last synced: 09 Apr 2025
https://github.com/kdm9/hons-thesis-stats
Some Rmd/Rnw files to analyse some datasets from my thesis. Pilfer methods at will, data is not for the taking.
Last synced: 09 Apr 2025
https://github.com/kdm9/static_samtools_bcftools
Static binaries for Samtools and BCFtools
Last synced: 14 Mar 2025
https://github.com/kdm9/libqes
A small C library, with a bioinformatic focus. Optimised for speed and a clean API
Last synced: 09 Apr 2025
https://github.com/kdm9/bamcb2rg
BAM utility that swaps the CB (cell barcode) and RG tags, such that each cell is considered a sample in variant calling
Last synced: 09 Apr 2025
https://github.com/kdm9/2015_kwip-samplesum
Debugging the samplesum mismatches
Last synced: 09 Apr 2025
https://github.com/kdm9/radhax
Scripts for analysis of reduced-representation sequencing (GBS, RADseq)
Last synced: 09 Apr 2025
https://github.com/kdm9/seedbank
Open Source Plant Accession Collection Database
Last synced: 09 Apr 2025