https://github.com/kellylab/microbial-landscapes

Code and data for 'Inferring the quasipotential landscape of microbial ecosystems with topological data analysis'

Last synced: 07 Mar 2026

https://github.com/kellylab/infograf

R functions

data-table entropy ggraph graph-theory igraph information-theory mds pcoa r

Last synced: 07 Mar 2026

https://github.com/kellylab/sequence_breadth_tools

Extracting and analyzing sequence breadth from Anvi'o databases

Last synced: 07 Mar 2026