Projects in Awesome Lists by mtvector
A curated list of projects in awesome lists by mtvector .
https://github.com/mtvector/ghostofmt
A set of tools for the biologists who sequence RNA or watch cells in the Thomson Lab
bioinformatics biological-data-analysis rstudio scientists tutorial
Last synced: 07 Jan 2026
https://github.com/mtvector/cleanome
Download genome annotations and prepare them to be made into reference annotations (e.g. with cellranger or cellranger-arc)
Last synced: 11 Apr 2025
https://github.com/mtvector/py-multi-seq
Python implementation of MULTIseq barcode alignment using fuzzy string matching and GMM barcode assignment.
Last synced: 29 Mar 2025
https://github.com/mtvector/dev-and-evo-of-primate-inhibitory-neurons
Resources from The development and evolution of inhibitory neurons in primate cerebrum
Last synced: 12 Aug 2025
https://github.com/mtvector/mtsc
Single Cell Analysis scripts and pipelines
Last synced: 29 Mar 2025
https://github.com/mtvector/mts-utils
Collection of functions from across repos
Last synced: 29 Mar 2025
https://github.com/mtvector/scantipode
Variational Inference for Cell Type Evolution
pyro scrna-seq scvi-tools variational-autoencoder
Last synced: 29 Mar 2025
https://github.com/mtvector/trashscopenexus
Sharing dirty scripts for the trashscope™
Last synced: 23 Aug 2025
https://github.com/mtvector/kallisto-annotation
Scripts to build kallisto annotations for new species using CAT gtfs
Last synced: 01 Sep 2025
https://github.com/mtvector/speciesreferenceprocessing
Scripts for building genomics references
Last synced: 29 Mar 2025
https://github.com/mtvector/crandata
Crested-style Chromatin-adapted AnnData built on XArray
Last synced: 05 Apr 2025