Projects in Awesome Lists by rhpvorderman
A curated list of projects in awesome lists by rhpvorderman .
https://github.com/rhpvorderman/fastqdedup
Alignment-free FASTQ deduplication.
alignment-free deduplication fastq hamming hamming-distance umi
Last synced: 09 Mar 2025
https://github.com/rhpvorderman/get-certificate-trustchain
A python script to fetch issuer certificates from the web to enable OCSP stapling verification.
Last synced: 09 Mar 2025
https://github.com/rhpvorderman/wdl-package-specification
WDL Package Specification drafts
Last synced: 09 Mar 2025
https://github.com/rhpvorderman/phred-to-error-rate
Convert FASTQ phred scores to probabilities
Last synced: 09 Mar 2025
https://github.com/rhpvorderman/htspy
Fast pythonic BAM processing according to the HTS format specifications..
Last synced: 09 Mar 2025
https://github.com/rhpvorderman/sudoku-solve
A python program to solve sudoku puzzles.
Last synced: 09 Mar 2025
https://github.com/rhpvorderman/midi-organ-project
Creating a full foot pedal for a MIDI organ
Last synced: 09 Mar 2025
https://github.com/rhpvorderman/vcfcompare2venn
Small script to parse vcfcompare's output directly into a venn diagram.
Last synced: 09 Mar 2025
https://github.com/rhpvorderman/test-nmake-github-actions
Minimal reproducer for nmake availability in windows environments on github actions
Last synced: 09 Mar 2025
https://github.com/rhpvorderman/herman-van-veen-later
Het lied "Later" van Herman van Veen, geschreven met GNU Denemo
Last synced: 09 Mar 2025
https://github.com/rhpvorderman/test_cpython_set
Test memory usage for cpython set implementation
Last synced: 09 Mar 2025
https://github.com/rhpvorderman/benchmarksgame
Entries for the computer languages benchmark game at https://benchmarksgame-team.pages.debian.net
Last synced: 09 Mar 2025
https://github.com/rhpvorderman/testgreaterthanpython
Test for counting the number of times an event is true in a iterable
Last synced: 09 Mar 2025
https://github.com/rhpvorderman/ascii-check
Header-only C library for ASCII string checking using various optimizations.
Last synced: 09 Mar 2025
https://github.com/rhpvorderman/samplesheet-to-struct
Converts a samplesheet to something that can be parsed by WDL.
Last synced: 09 Mar 2025
https://github.com/rhpvorderman/fastqarchive
Compress fastq data for archival purposes.
Last synced: 09 Mar 2025
https://github.com/rhpvorderman/bytes_sort
Example implementation for bytes sorting in CPython
Last synced: 09 Mar 2025
https://github.com/rhpvorderman/vcf-compare
WDL pipeline for comparing multiple VCF pairs
Last synced: 09 Mar 2025
https://github.com/rhpvorderman/galaxy-admin
Simple scripts for various galaxy admin tasks
Last synced: 09 Mar 2025
https://github.com/rhpvorderman/cromwell-mysql-starter
Scripts and information on starting a per user cromwell mysql database
Last synced: 09 Mar 2025
https://github.com/rhpvorderman/gzip_static
Compress your static website with gzip for faster serving with NGiNX's gzip_static on.
checksum compression gzip idempotent precompress static static-site zopfli
Last synced: 09 Mar 2025
https://github.com/rhpvorderman/ansible-role-license-changer
Add license headers to files in a directory
Last synced: 09 Mar 2025
https://github.com/rhpvorderman/fastqsync
simple script for syncing FASTQ files
Last synced: 09 Mar 2025
https://github.com/rhpvorderman/sequali
Fast sequencing data quality metrics
Last synced: 09 Mar 2025
https://github.com/rhpvorderman/fastqcompress
A repository looking at ways to compress sequencing data
Last synced: 14 Apr 2025
https://github.com/rhpvorderman/sacct-analyze
Simple python script to quickly parse sacct results into max rss etc.
Last synced: 21 Mar 2025
https://github.com/rhpvorderman/swait
Slurm command that waits on job exit and returns job exit code.
Last synced: 15 May 2025
https://github.com/rhpvorderman/python-buffer-methods
Fast operations on Python objects supporting the buffer protocol, such as array.array and memoryview.
Last synced: 09 Mar 2025