Projects in Awesome Lists by waldronlab

Streamline BugSigDB curation with AI-powered scientific paper analysis. Automatically extracts essential microbiome study metadata from research papers, reducing manual curation time and improving data quality for the BugSigDB database.

ai api bioinformatics microbiome ml ncbi paper-analysis python

Last synced: 08 Jun 2026

https://github.com/waldronlab/openreviewr

R Client for OpenReview API and Script to Submit an OpenReview Support Request Form

Last synced: 27 May 2026

https://github.com/waldronlab/ai-agent-skills

A collection of AI agent skills relevant to our work, including analysis and development of R/Bioconductor packages + statistical and bioinformatic analysis.

Last synced: 07 Apr 2026

https://github.com/waldronlab/pensim

Tuning and nested cross-validation for L1, L2, and Elastic Net penalized regression

Last synced: 27 May 2026

https://github.com/waldronlab/curator-desk

Curator dashboard for reviewing BioAnalyzer predictions — sortable table, field-level feedback, submit via GitHub Issues & PRs.

Last synced: 07 Mar 2026

https://github.com/waldronlab/ncbitaxon

Hosting the NCBI taxnomy

Last synced: 28 May 2026

https://github.com/waldronlab/sweave2rmd_conversiontemplate

Last synced: 11 Mar 2026

https://github.com/waldronlab/primers

Primers based on the last CC-BY-4.0 licensed version of https://github.com/rstudio-education/primers (commit a3b5e96)

Last synced: 12 Mar 2026

https://github.com/waldronlab/newsfeed

Compile NEWS files from several packages

Last synced: 06 Jun 2026

ecosyste.ms

Data

Tools

Indexes

Applications

Experiments

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