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Projects in Awesome Lists tagged with average-nucleotide-identity

A curated list of projects in awesome lists tagged with average-nucleotide-identity .

https://github.com/widdowquinn/pyani

Application and Python module for average nucleotide identity analyses of microbes.

ani average-nucleotide-identity bioinformatics classification taxonomy taxonomy-assignment

Last synced: 01 Nov 2024

https://github.com/althonos/pyskani

PyO3 bindings and Python interface to skani, a method for fast genomic identity calculation using sparse chaining.

ani average-nucleotide-identity bioinformatics metagenomes python-bindings python-library taxonomy

Last synced: 27 Oct 2024

https://github.com/althonos/pyfastani

Cython bindings and Python interface to FastANI, a method for fast whole-genome similarity estimation.

ani average-nucleotide-identity bioinformatics cython-library metagenomes python-bindings python-library taxonomy

Last synced: 13 Oct 2024

https://github.com/althonos/orthoani

A Python implementation of the OrthoANI algorithm for nucleotide identity measurement.

average-nucleotide-identity bioinformatics biopython orthoani python python-module

Last synced: 13 Oct 2024