Projects in Awesome Lists tagged with demultiplexing

A curated list of projects in awesome lists tagged with demultiplexing .

- Recently synced
- Stars

https://github.com/nf-core/nanoseq

Nanopore demultiplexing, QC and alignment pipeline

alignment demultiplexing nanopore nextflow nf-core pipeline qc workflow

Last synced: 06 May 2025

https://github.com/opengene/defq

Please switch to https://github.com/OpenGene/defastq

demultiplexing demux dual-index fastq illumina index sequencing split

Last synced: 10 Apr 2025

https://github.com/arogozhnikov/demuxalot

Reliable, scalable, efficient demultiplexing for single-cell RNA sequencing

biotech demultiplexing scrnaseq single-cell-analysis

Last synced: 20 Dec 2024

https://github.com/ebedthan/sabreur

fast, reliable and handy demultiplexing tool for fastx files

bioinformatics demultiplexing rust sequence-analysis

Last synced: 21 Mar 2025

https://github.com/lipkau/spread

This module implements helper functions that allow you to set parameters to a context. The parameters provided will be spread across the commands in the context.

demultiplexing demux module powershell spread

Last synced: 05 Mar 2025

https://github.com/astrabert/rrequested

RREQUESTED: A versatile shellscript tool based on Python scripts to preprocess raw basecalled reads with quality and size filtering and ex-novo demultiplexing

beginner-friendly bioinformatics conda demultiplexing easy-to-use genomics next-generation-sequencing oxford-nanopore