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Projects in Awesome Lists tagged with ecoli

A curated list of projects in awesome lists tagged with ecoli .

https://github.com/ssi-dk/bps_fbi_sp_ecoli

Ecoli species specific scripts in nbdev2 format.

bps ecoli fbi nbdev

Last synced: 23 Oct 2024

https://github.com/ssi-dk/bifrost_sp_ecoli

Ecoli related analysis for the SOFI platform.

bifrost ecoli sofi typing

Last synced: 12 Nov 2024

https://github.com/ssi-dk/bps_fbi_fsc_virulencefinder

Bash scripts to run virulencefinder and serotypefinder in local settings on ecoli fasta and fastq.gz files.

assemblies bash ecoli rawreads serotypefinder virulencefinder

Last synced: 12 Nov 2024

https://github.com/ssi-dk/ecoli_fbi

Determines the serotype and virulence in Escherichia coli isolates using NGS data (reads) through kmer alignment.

ecoli fbi genes serotype virulence

Last synced: 12 Nov 2024

https://github.com/wisdomenigma/metabiocargo

Meta-Bio-Cargo predict #Ru-Bi-CO-S protein

cyanobacteria dna-sequences ecoli protein protein-structure

Last synced: 11 Nov 2024