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Projects in Awesome Lists tagged with epidemic-modelling

A curated list of projects in awesome lists tagged with epidemic-modelling .

https://github.com/epiverse-trace/cfr

R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series

case-fatality-rate epidemic-modelling epidemiology epiverse health-outcomes outbreak-analysis r r-package sdg-3

Last synced: 02 Dec 2024

https://github.com/epiverse-trace/finalsize

R package to calculate the final size of an SIR epidemic in populations with heterogeneity in social contacts and disease susceptibility

epidemic-modelling epidemiology epiverse outbreak-analysis r r-package rcpp sdg-3

Last synced: 02 Dec 2024

https://github.com/epiverse-trace/epichains

Methods for simulating and analysing the sizes and lengths of infectious disease transmission chains from branching process models

branching-processes epidemic-dynamics epidemic-modelling epidemic-simulations epidemiology epidemiology-models outbreak-simulator r-package r-stats transmission-chain transmission-chain-reconstruction

Last synced: 02 Dec 2024

https://github.com/epiverse-trace/epidemics

[Not published - under active development] A library of published compartmental epidemic models, and classes to represent demographic structure, non-pharmaceutical interventions, and vaccination regimes, to compose epidemic scenarios.

decision-support epidemic-modelling epidemic-simulations epidemiology epiverse infectious-disease-dynamics model-library non-pharmaceutical-interventions r r-package rcpp rcppeigen scenario-analysis vaccination

Last synced: 02 Dec 2024

https://github.com/epiverse-trace/scenarios

[SUSPENDED]: R package to compare epidemic scenario model outcomes.

epidemic-modelling epidemiology epiverse r r-package

Last synced: 02 Dec 2024