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Projects in Awesome Lists tagged with outbreak-analysis

A curated list of projects in awesome lists tagged with outbreak-analysis .

https://github.com/epiverse-trace/cfr

R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series

case-fatality-rate epidemic-modelling epidemiology epiverse health-outcomes outbreak-analysis r r-package sdg-3

Last synced: 02 Dec 2024

https://github.com/epiverse-trace/finalsize

R package to calculate the final size of an SIR epidemic in populations with heterogeneity in social contacts and disease susceptibility

epidemic-modelling epidemiology epiverse outbreak-analysis r r-package rcpp sdg-3

Last synced: 02 Dec 2024

https://github.com/epiverse-trace/epico

R package for statistical and spatiotemporal modeling of epidemiological data for vector-borne diseases in Colombia

colombia decision-support demographics epiverse outbreak-analysis r r-package spatio-temporal-analysis vector-borne-diseases

Last synced: 02 Dec 2024

https://github.com/epiverse-trace/episoap

[Not published - under active development] A Store of Outbreak Analytics Pipelines Provided as Rmarkdown Report Templates

automated-report decision-support epidemiology epiverse literate-programming outbreak-analysis pipelines r r-package rmarkdown-templates

Last synced: 02 Dec 2024

https://github.com/gauravcodepro/bacterial-model-fractions

This repository contains the risk model function of the disease model in virbrio infections and how can be modeled to estimate the attributable rates

infectious-disease-models infectious-diseases modelling outbreak-analysis outbreak-data-analysis outbreak-detection python risk-analysis vibrio-cholerae

Last synced: 02 Jan 2025