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Projects in Awesome Lists tagged with gwas-tools

A curated list of projects in awesome lists tagged with gwas-tools .

https://github.com/shujiahuang/qmplot

A Python package for creating high-quality manhattan and Q-Q plots from GWAS results.

genomics-data-visualization gwas gwas-tools matplotlib python visualization

Last synced: 06 Nov 2024

https://github.com/katiesaund/hogwash

Three bacterial GWAS methods all rolled into one easy-to-use R package

bacterial-gwas bgwas convergence genomics gwas gwas-tools r r-package

Last synced: 14 Oct 2024

https://github.com/lcrawlab/i-LDSC

Code and simulations using interaction-LD score regression

epistasis gwas gwas-summary-statistics gwas-tools heritability heritability-estimation ld-score-regression

Last synced: 03 Dec 2024

https://github.com/snitkin-lab-umich/prewas

R package to perform data pre-processing for more informative bacterial GWAS

bacterial-genomes gwas gwas-tools microbiology r r-package

Last synced: 14 Oct 2024

https://github.com/borgwardtlab/hogimine

Higher-order genetic interaction discovery with network-based biological priors.

bioinformatics gwas-tools ismb2023 pattern-mining

Last synced: 21 Nov 2024

https://github.com/epistasislab/regens

Recombines real genomic segments to simulate whole genomes

gwas-tools simulated-datasets

Last synced: 16 Nov 2024