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Projects in Awesome Lists tagged with plink

A curated list of projects in awesome lists tagged with plink .

https://github.com/limix/pandas-plink

PLINK reader for Python.

bed-format file-format genotype plink reader

Last synced: 13 Apr 2025

https://github.com/kostapc/putty-tunnel-manager

Fixes and new release. PuTTY Tunnel Manager allows you to easily open tunnels, that are defined in a PuTTY session, from the system tray. You can also move the tunnels from PuTTY to PuTTY Tunnel Manager. This allows you to use PuTTY just for SSH shell sessions (without opening tunnels), and use PuTTY Tunnel Manager just for tunneling.

plink putty putty-tunnel-manager shh ssh-tunnel tunnel

Last synced: 20 Nov 2024

https://github.com/openmendel/snparrays.jl

Compressed storage for SNP data

julia openmendel plink snps

Last synced: 07 Apr 2025

https://github.com/quantgen/bedmatrix

A matrix-like wrapper around PLINK .bed files

bed cran genetics genomics plink plink2 r r-pkg

Last synced: 06 May 2025

https://github.com/AJResearchGroup/plinkr

Work with PLINK from R

gwas plink plink2 r r-package

Last synced: 04 Dec 2024

https://github.com/kenhanscombe/plink-custom-r

Setup and starter script for the PLINK R plugin.

genetic-analysis plink r statistical-analysis

Last synced: 22 Apr 2025

https://github.com/mikedacre/lddirection

Get information about direction of agreement for any two lists of SNPs, based on LDlink and plink

genome linkage-disequilibrium plink snps

Last synced: 20 Feb 2025

https://github.com/benknoble/vim-plink

Runtime files for plink

filetype plink syntax vim

Last synced: 22 Feb 2025

https://github.com/georgiesamaha/proberemap

Map SNP positions to a supplied reference assembly using BLAST. Filter results for best hit. Output in plink format.

array blast blastn fasta genetics genomics genotype illumina map plink python3 snp

Last synced: 15 Mar 2025