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Projects in Awesome Lists tagged with tandem-repeats

A curated list of projects in awesome lists tagged with tandem-repeats .

https://github.com/bcgsc/straglr

Tandem repeat expansion detection or genotyping from long-read alignments

bioinformatics genomics long-reads tandem-repeats

Last synced: 09 Nov 2024

https://github.com/jfjlaros/tssv

Targeted characterisation of short structural variation.

alignment amplicon counting edit-distance levenshtein primers tandem-repeats

Last synced: 13 Nov 2024

https://github.com/ssi-dk/cdiff_fbi

Typing of Clostridioides difficile isolates using NGS data (reads and contigs) based on tandem repeat loci (TR6, TR10), and toxin genes (cdtA, cdtB, tcdA, tcdB, tcdC).

cdiff fbi tandem-repeats toxins typing

Last synced: 12 Nov 2024